DRSC/TRiP Functional Genomics Resources

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Protein Alignment neo and cutl-20

DIOPT Version :9

Sequence 1:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster
Sequence 2:NP_490798.1 Gene:cutl-20 / 171678 WormBaseID:WBGene00018787 Length:360 Species:Caenorhabditis elegans


Alignment Length:374 Identity:82/374 - (21%)
Similarity:147/374 - (39%) Gaps:57/374 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   377 NVTIECGGGDMLARIRTSKLFNGKVYAK-GSPKSCSVDVKSALDFELRMNYHDLECNVRQSTAGR 440
            :.:|.|...|.|.:|:..:.|.|.:.:: |.||....:.....|.:.::......|:.:::..|.
 Worm    25 DTSIACDKTDFLLKIKFDENFRGTIQSRAGHPKCIYANGTLQSDTKYQLKIPLTGCSTKENGEGN 89

  Fly   441 YVNDI-IIQHHDMIVTSSDLGLALAC--------QYDLTNKSVS-NGVDLDVRGDIMPALSEEVI 495
            ..|:| ::..::.....:|....|.|        :..:|   || .|:.::.......:||:...
 Worm    90 LENEIEVVMANNEFNAETDKRFLLTCIPAAPVPKESQVT---VSFGGITINSDATTASSLSDNKT 151

  Fly   496 VESPNVIMRITSRDGSDMMRSAEVGDPLALKFEIVDEQSPYEIFIRELVAMDGVDNSEITLIDSN 560
            |:....::...|.|...:.|...|||.:....|:.|:|:..   |....|.||:  ||:.|.||:
 Worm   152 VDYRVRVLDGDSLDSKQLQRPLAVGDRVTYTVEMSDDQNGR---IGRCWANDGI--SELPLSDSH 211

  Fly   561 GC--PTDHFIMGPIYKGSVSGKMLLSN-FDAFKFPSSEVVQFRALVTPCMPSCEPVQCEQEDTSG 622
            ||  .|...:.|.......:||.:..| ..|:.||:|..|.....:..|: :|....|.      
 Worm   212 GCSLQTSGEVWGDFEVTRRNGKTIFYNHIKAWAFPTSNEVNIFCNLHVCV-TCTQAACR------ 269

  Fly   623 EFRSLLSYGRKRRSLNTTDDHPRPRRD-----IDTSKKSAPSDMLLVQSIQITDKFGFKQDKQES 682
                    ||:||. |....|.....|     ||.|..|.|        |.:...|..   |:|:
 Worm   270 --------GRERRH-NPPPQHSSTVSDPFSSTIDVSDISPP--------IAVRTSFRL---KREA 314

  Fly   683 GDFYDGNETTFTANEEGHGFCVNAIGLITAATIFLLTQLAVIAIWTYCY 731
            ....:.::||.:.:.:.   ..|:....::|.:..|..|.::|...:.|
 Worm   315 VARLETSQTTSSVSTDS---STNSSSSSSSANLSFLFFLLIVASGVFDY 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
neoNP_651733.1 PAN_1 120..197 CDD:278453
PAN_AP_HGF 211..285 CDD:238532
PAN_1 294..373 CDD:278453
ZP 381..615 CDD:214579 56/247 (23%)
cutl-20NP_490798.1 Zona_pellucida 30..268 CDD:365872 56/246 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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