DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7829 and prtn3

DIOPT Version :9

Sequence 1:NP_651732.1 Gene:CG7829 / 43522 FlyBaseID:FBgn0039703 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001006847.1 Gene:prtn3 / 448597 XenbaseID:XB-GENE-5805214 Length:245 Species:Xenopus tropicalis


Alignment Length:237 Identity:78/237 - (32%)
Similarity:110/237 - (46%) Gaps:30/237 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 RIVGGFPADIANIPYIVSIQLYGIHHCGGSIINNHTILTAGHCLNGVPHRLLKVKVGGTS----- 86
            :||||..|...:.|||.|:||.|.|.||||:|....::||.||:......|:.|.:|..|     
 Frog    25 QIVGGREATPNSHPYIASLQLRGRHFCGGSLIAPQFLMTAAHCMENTASNLVTVVLGAHSLRANE 89

  Fly    87 ----RYRKDGELFSVADLQVHEN-FNPKTMDYDIGIIRLTKNLTLSRKVK--AIPINPERVAEGT 144
                |:|.:         ||.|| |||.|:..||.|::|.:.::|:.||:  ::|...|.|..||
 Frog    90 ATKQRFRVN---------QVFENGFNPLTLQNDIVILKLDRPVSLNGKVQVVSLPSANEDVPAGT 145

  Fly   145 YATIAGWGFKSMNGPPSDSLRYARVPIVNQTACRNLLGKTVTDRMLCAGYLKGGTDACQMDSGGP 209
            ....||||..|..|...|.|:...|.:..|..||        ...:|.|........|..|||||
 Frog   146 QCVTAGWGRLSTEGQIPDRLQELNVTVTRQNLCR--------PNNICTGVFMQQAGICFGDSGGP 202

  Fly   210 LSVREQLVGIVSWGV-GCALADKPGVYSRLDALHPWLDQVLN 250
            |.....:.||.|:.: .|.....|..:||:.....::|..:|
 Frog   203 LVCNGVIQGITSFIIRSCGNGVTPDFFSRVSLFRRFIDDAIN 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7829NP_651732.1 Tryp_SPc 27..244 CDD:214473 76/229 (33%)
Tryp_SPc 28..248 CDD:238113 77/232 (33%)
prtn3NP_001006847.1 Tryp_SPc 26..241 CDD:238113 76/231 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.