DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7829 and F12

DIOPT Version :10

Sequence 1:NP_651732.1 Gene:CG7829 / 43522 FlyBaseID:FBgn0039703 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001014028.1 Gene:F12 / 306761 RGDID:1359175 Length:603 Species:Rattus norvegicus


Alignment Length:240 Identity:84/240 - (35%)
Similarity:125/240 - (52%) Gaps:20/240 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 RIVGGFPADIANIPYIVSIQLYGIHHCGGSIINNHTILTAGHCLNGVPHRLLKVKVGGTSRYRKD 91
            |:|||..|...:.|||.:: .:|...|.||:|:...:|||.|||...|.......|.|..|:.:.
  Rat   361 RVVGGLVALPGSHPYIAAL-YWGDSFCAGSLIDPCWVLTAAHCLQKRPAPEELTVVLGQDRHNQS 424

  Fly    92 GE---LFSVADLQVHENFNPKTMDYDIGIIRL--TKN--LTLSRKVK--AIPINPERVAEGTYAT 147
            .|   ..:|...::||.|:.||..:|:.::||  .||  ..||..|:  .:|.:....:|.....
  Rat   425 CERCQTLAVHSYRLHEGFSSKTYQHDLALLRLRGRKNSCAILSPHVQPVCLPSSAAPPSETVLCE 489

  Fly   148 IAGWGFKSMNGPP-SDSLRYARVPIVNQTAC--RNLLGKTVTDRMLCAGYLKGGTDACQMDSGGP 209
            :||||.:...... :..|:.|:||.::...|  .|:.|..:...|||||:|:||.||||.|||||
  Rat   490 VAGWGHQFEGAEEYATFLQEAQVPFISLDRCSSSNVHGDAILPGMLCAGFLEGGADACQGDSGGP 554

  Fly   210 L----SVREQ---LVGIVSWGVGCALADKPGVYSRLDALHPWLDQ 247
            |    .|.|:   |.|::|||.||...:|||||:.:.....|:.:
  Rat   555 LVCDEGVTERQLTLRGVISWGSGCGDRNKPGVYTDVANYLDWIQE 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7829NP_651732.1 Tryp_SPc 27..244 CDD:214473 83/235 (35%)
F12NP_001014028.1 FN2 40..87 CDD:238019
EGF_CA 95..130 CDD:238011
FN1 132..170 CDD:238018
EGF 177..207 CDD:394967
Kringle 216..294 CDD:395005
Tryp_SPc 362..600 CDD:238113 83/239 (35%)
Blue background indicates that the domain is not in the aligned region.

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