DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7829 and Tpsb2

DIOPT Version :10

Sequence 1:NP_651732.1 Gene:CG7829 / 43522 FlyBaseID:FBgn0039703 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_062053.2 Gene:Tpsb2 / 29268 RGDID:3065 Length:274 Species:Rattus norvegicus


Alignment Length:278 Identity:92/278 - (33%)
Similarity:135/278 - (48%) Gaps:38/278 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 MYKLWWKLLLLQASGCLSL-ESRPDP-----RIVGGFPADIANIPYIVSIQL---YGIHHCGGSI 57
            |.||   ||||..|...|| .:.|.|     .||||..|..:..|:.||::.   :.:|.||||:
  Rat     1 MLKL---LLLLALSPLASLVHAAPCPVKQRVGIVGGREASESKWPWQVSLRFKFSFWMHFCGGSL 62

  Fly    58 INNHTILTAGHC--LNGVPHRLLKVKVGGTSRYRKDGELFSVADLQVHENFNPKTMDYDIGIIRL 120
            |:...:|||.||  |:.....|.:|::.....|..| :|.:|....||.::.......||.::.|
  Rat    63 IHPQWVLTAAHCVGLHIKSPELFRVQLREQYLYYAD-QLLTVNRTVVHPHYYTVEDGADIALLEL 126

  Fly   121 TKNLTLSRKV--KAIPINPERVAEGTYATIAGWGFKSMNGP--PSDSLRYARVPIVNQTACRNLL 181
            ...:.:|..:  .::|...|....||...:.|||....:.|  |...|:..:||||..:.|....
  Rat   127 ENPVNVSTHIHPTSLPPASETFPSGTSCWVTGWGDIDSDEPLLPPYPLKQVKVPIVENSLCDRKY 191

  Fly   182 G---------KTVTDRMLCAGYLKGGTDACQMDSGGPLSVREQ----LVGIVSWGVGCALADKPG 233
            .         ..|.|.|||||..:  :|:||.||||||..:.:    ..|:||||.|||.|::||
  Rat   192 HTGLYTGDDVPIVQDGMLCAGNTR--SDSCQGDSGGPLVCKVKGTWLQAGVVSWGEGCAEANRPG 254

  Fly   234 VYSR----LDALHPWLDQ 247
            :|:|    ||.:|.::.|
  Rat   255 IYTRVTYYLDWIHRYVPQ 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7829NP_651732.1 Tryp_SPc 27..244 CDD:214473 79/242 (33%)
Tpsb2NP_062053.2 Tryp_SPc 30..268 CDD:238113 78/240 (33%)

Return to query results.
Submit another query.