DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7829 and F11

DIOPT Version :10

Sequence 1:NP_651732.1 Gene:CG7829 / 43522 FlyBaseID:FBgn0039703 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001398595.1 Gene:F11 / 290757 RGDID:1309364 Length:622 Species:Rattus norvegicus


Alignment Length:238 Identity:79/238 - (33%)
Similarity:126/238 - (52%) Gaps:13/238 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 PRIVGGFPADIANIPYIVSIQLYGIHHCGGSIINNHTILTAGHCLNGV-PHRLLKVKVG--GTSR 87
            ||:.||..:.....|:.|::.....|.||||||.|..||||.||.:|. ..:.|:|..|  ..|.
  Rat   386 PRVFGGAASVHGEWPWQVTLHTTQGHLCGGSIIGNRWILTAAHCFSGTETPKTLRVYGGIVNQSE 450

  Fly    88 YRKDGELFSVADLQVHENFNPKTMDYDIGIIRL--TKNLTLSRKVKAIPINPERVAEGTYATIAG 150
            ..:|...|.|.::.:|:.:......:||.:::|  ..|.|..::...:|...:|....|...:.|
  Rat   451 INEDTTFFRVQEMIIHDQYTSAESGFDIALLKLEPAMNYTDFQRPICLPSKGDRNVVHTECWVTG 515

  Fly   151 WGFKSMNGPPSDSLRYARVPIVNQTACRNLLGK-TVTDRMLCAGYLKGGTDACQMDSGGPLSVRE 214
            ||:.........:|:.|:||:|:...|:....| .:|::::||||.:||.|.|:.|||||||.:.
  Rat   516 WGYTKSRDEVQSTLQKAKVPLVSNEECQTRYRKHKITNKVICAGYKEGGKDTCKGDSGGPLSCKH 580

  Fly   215 ----QLVGIVSWGVGCALADKPGVYSRLDALHPWLDQVLNKSK 253
                .||||.|||.||...::||||:.   :..::|.:|.|::
  Rat   581 NGVWHLVGITSWGEGCGQKERPGVYTN---VAKYVDWILEKTQ 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7829NP_651732.1 Tryp_SPc 27..244 CDD:214473 75/226 (33%)
F11NP_001398595.1 APPLE 20..103 CDD:128519
APPLE 110..193 CDD:128519
APPLE 200..283 CDD:128519
APPLE 291..374 CDD:128519
Tryp_SPc 388..615 CDD:238113 75/229 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.