DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7829 and svh-1

DIOPT Version :9

Sequence 1:NP_651732.1 Gene:CG7829 / 43522 FlyBaseID:FBgn0039703 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:243 Identity:74/243 - (30%)
Similarity:122/243 - (50%) Gaps:26/243 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 RIVGGFPADIANIPYIVSI--QLYGIHHCGGSIINNHTILTAGHCLNGVPHRL--LKVKVGGTSR 87
            |:||||.......|:..::  :....||||.||::...::||.||.. ...|:  .:|.||....
 Worm   712 RVVGGFETVPGAFPWTAALRNKATKAHHCGASILDKTHLITAAHCFE-EDERVSSYEVVVGDWDN 775

  Fly    88 YRKDG--ELFSVADLQVHENFNPKTMD---YDIGIIRLT-KNLTLSRKVKAI--PINPERVAEGT 144
            .:.||  ::|.:.  ::|  |.|...|   :||.|:.:. ..:..:...:.|  |........|.
 Worm   776 NQTDGNEQIFYLQ--RIH--FYPLYKDIFSHDIAILEIPYPGIEFNEYAQPICLPSKDFVYTPGR 836

  Fly   145 YATIAGWGFKSMNGPPSDSLRYARVPIVNQTACRN--LLGKTVTDRMLCAGYLKGGTDACQMDSG 207
            ...::|||  ||....::.|:.|.:||:|:..|.|  .:..:::....|||||:||.|:||.|||
 Worm   837 QCVVSGWG--SMGLRYAERLQAALIPIINRFDCVNSSQIYSSMSRSAFCAGYLEGGIDSCQGDSG 899

  Fly   208 GPLSVREQ-----LVGIVSWGVGCALADKPGVYSRLDALHPWLDQVLN 250
            ||.:.|.:     |.|::|||.|||...:||:|:.:.....|:..::|
 Worm   900 GPFACRREDGAFVLAGVISWGDGCAQKKQPGIYTMVAPYLSWISAIIN 947

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7829NP_651732.1 Tryp_SPc 27..244 CDD:214473 72/235 (31%)
Tryp_SPc 28..248 CDD:238113 72/238 (30%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566
SRCR_2 599..681 CDD:382996
Tryp_SPc 713..945 CDD:238113 72/238 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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