Protein Alignment ca and RUG3

DIOPT Version :9

• Sequence 1: NP_001287593.1
• Gene: ca / 43518
• FlyBaseID: FBgn0000247
• Length: 1961
• Species: Drosophila melanogaster
• Sequence 2: NP_974971.2
• Gene: RUG3 / 836208
• AraportID: AT5G60870
• Length: 452
• Species: Arabidopsis thaliana
• Alignment Length: 418
• Identity: 91/418 - (21%)
• Similarity: 138/418 - (33%)
• Gaps: 144/418 - (34%)

  Fly  1193 LYSLGNNNLCQLGIG-------------------RHMQMALQPMLVTALDGMNITM-LEAGQYHN 1237
            |:|.|.....|||.|                   :...:|..|..:.| |..:..: :..|.:|:
plant    50 LFSWGRGASGQLGGGIEEIRMYPSPVANLLFRSDQSFSLAQTPGRIDA-DSSSFRIGISCGLFHS 113

  Fly  1238 AAVADGKLYMWGWGIYGQLGQGSCENIATPQLVSFFKFKKILQISLGHAHTLVLCGAPNSHMEAN 1302
            ....||.|::||.|..|:||.|...::..|.|...|:...|..|:||..|::.|          .
plant   114 GLTIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVAL----------T 168

  Fly  1303 HCGNELFVFGSNHFGQLGTGNSDHG-DTKTNLPVRLEVG-DCSLRLIHTKFFTNLAVDEQDRLFT 1365
            |.| ::|.:|...||.||     |. .|:..:|.|::.. ||.:..|.|......|:.|...|:.
plant   169 HQG-DVFTWGYGGFGALG-----HKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITESGELYM 227

  Fly  1366 WGSSPQALRLANQIKRRANAKQKMEENQQRELLSKQLEATLLPAPIPSTSTLVEPTTSYAAVVAG 1430
            ||                     .||...|                                 .|
plant   228 WG---------------------REEGDGR---------------------------------LG 238

  Fly  1431 STPKSSVSDTKDCQDVQNEAAPSDATETIAPASAKAAPPPVPVASPPVLVPEPDPTEHLTPHLVD 1495
            ..|               ...|::......|:..||.  .|||||
plant   239 LGP---------------GRGPNEGGGLSVPSKVKAL--TVPVAS-------------------- 266

  Fly  1496 TSEVAGRILQISSGLFHFCLISSSCTLYTWGKNLEHQLGTEDKDRRAVLKPSPIDSIE--RPMYV 1558
                      :|.|.|....::....|:.||.|..::||.  .|.....:|.|:.|:|  |...:
plant   267 ----------VSCGGFFTMALTKEGQLWNWGANSNYELGR--GDNLGGWEPMPVPSLEGVRITQI 319

  Fly  1559 DCGSDFTLVMTTDHVVRAFGGNSNGQCG 1586
            .||...:|.:|.:..|.::|...:||.|
plant   320 ACGGYHSLALTEEGKVLSWGHGGHGQLG 347

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ca	NP_001287593.1	ATS1	1158..1588	CDD:227511	91/418 (22%)
		RCC1_2	1175..1200	CDD:290274	3/6 (50%)
		RCC1	1193..1240	CDD:278826	13/66 (20%)
		RCC1	1242..1291	CDD:278826	18/48 (38%)
		RCC1_2	1503..1532	CDD:290274	7/28 (25%)
		RCC1	1522..1568	CDD:278826	15/47 (32%)
		RCC1_2	1558..1584	CDD:290274	6/25 (24%)
RUG3	NP_974971.2	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5184
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1062377at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820