DRSC/TRiP Functional Genomics Resources

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Protein Alignment ca and RUG2

DIOPT Version :10

Sequence 1:NP_733309.3 Gene:ca / 43518 FlyBaseID:FBgn0000247 Length:1961 Species:Drosophila melanogaster
Sequence 2:NP_199644.2 Gene:RUG2 / 834886 AraportID:AT5G48330 Length:455 Species:Arabidopsis thaliana


Alignment Length:470 Identity:109/470 - (23%)
Similarity:173/470 - (36%) Gaps:142/470 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1181 GRQHTLILTNNGLYSLGNNNLCQLGI------GRHMQMALQPMLVTALDGMNITMLEAGQYHNAA 1239
            |.:.|::       |.|:.||..||:      |..|. |.:|.:|:.|.. :|:.:.||.||:.|
plant    41 GERRTVM-------SFGDGNLGALGLSSSSIPGMGMD-AYEPTVVSNLPS-DISSISAGHYHSLA 96

  Fly  1240 V-ADGKLYMWGWGIYGQLGQ----GSCENIATPQLVSFFKFKKILQISLGHAHTLVLCGAPNSHM 1299
            | :.|:::.||....||||:    .|.::.:.|:.|.                     |..|.::
plant    97 VTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVE---------------------GLENVNV 140

  Fly  1300 EANHCG----------NELFVFGSNHFGQLGTGNSDHGDTKTNLPVRLE------VGDCSLRLIH 1348
            :|....          ..|:|:|.:..||||.||   |..:..:|.|:|      |...||...|
plant   141 QAAFASGVVSAAIGDDGSLWVWGRSKRGQLGLGN---GIIEARVPSRVENLAAEHVVKVSLGWGH 202

  Fly  1349 TKFFTNLAVDEQDRLFTWGSSPQALRLANQIKRRANAKQKMEENQQRELLSKQLEATLLPAPIPS 1413
            .     ||:....::|.||..... |:.|                    :...|||:||      
plant   203 A-----LALTVDGKVFGWGYVADG-RVGN--------------------VGLPLEASLL------ 235

  Fly  1414 TSTLVEPTTSYAAVVAGSTPKSSVSDTKDCQDVQNEAAPSDATETIAPASAKAAPPPVPVASPPV 1478
                            .|....|:.......|:..|||.....|.::..:      .:|:|..|.
plant   236 ----------------DSITDGSMKGHHAAGDLNLEAAEKKVVEAMSKEN------DMPIAWEPC 278

  Fly  1479 LVPEPDPTEHLTPHLVDTSEVAGRILQISSGLFHFCLISSSCTLYTWGKNLEHQLGTEDKDRRAV 1543
            ||.|            ..:|   ::..|:.|..|..::....||.:.|.|:..|||...:|    
plant   279 LVEE------------TCNE---KVADIACGSDHSLILCHDGTLLSAGSNIYGQLGRSKQD---- 324

  Fly  1544 LKPSPIDSIERPMYVDCGSDFTLVMTT--DHVVRAFGGNSNGQCGR----DLGPSVERMRQRVVC 1602
            |...|:|..|.|:.:..|...:|.:..  :..:.::|.|.:.|.||    :|...||.....   
plant   325 LGMKPVDITESPISIAAGLGHSLAICNRGERNILSWGWNRSRQLGRGKPENLPREVEGFDGE--- 386

  Fly  1603 LPATKRLVRFESQCV 1617
            .||:....|..|.||
plant   387 SPASVSAGRVHSLCV 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
caNP_733309.3 ATS1 1181..1587 CDD:444065 98/434 (23%)
RUG2NP_199644.2 ATS1 45..429 CDD:444065 108/466 (23%)

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