DRSC/TRiP Functional Genomics Resources

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Protein Alignment ca and AT5G19420

DIOPT Version :10

Sequence 1:NP_733309.3 Gene:ca / 43518 FlyBaseID:FBgn0000247 Length:1961 Species:Drosophila melanogaster
Sequence 2:NP_001190338.1 Gene:AT5G19420 / 832062 AraportID:AT5G19420 Length:1139 Species:Arabidopsis thaliana


Alignment Length:676 Identity:158/676 - (23%)
Similarity:244/676 - (36%) Gaps:173/676 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1101 FRINYEDNQFAIESSRFKPISAGCAYCACVVDGTAYFWG---SSGI--PSYYSAQKSTEPPEPAH 1160
            ||::...   ||.||     |.|..:......|..:.||   ..|:  ...:....|.|....:.
plant   279 FRVSLSS---AISSS-----SHGSGHDDGDTLGDVFMWGEGIGEGVLGGGNHRVGSSLEIKMDSL 335

  Fly  1161 AVKSLDLLSQLNLQVHAIKCGRQHTLILTNNG-LYSLGNNNLCQLGIGRHMQMALQPMLVTALDG 1224
            ..|:|:  |.:.|.|..|.||.||.:::|..| .:|.|..:..:||.|....:. .|.|:.||:.
plant   336 LPKALE--STIVLDVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQ-HPKLIDALNT 397

  Fly  1225 MNITMLEAGQYHNAAVA-DGKLYMWGWGIYGQLGQGSCENIATPQLVSF-FKFKKILQISLGHAH 1287
            .||.::..|:||:.||. .|.||.||.|.:|.||.|:..:...|:.|:| .:...:..|:.|..|
plant   398 TNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYH 462

  Fly  1288 TLVLCGAPNSHMEANHCGNELFVFGSNHFGQLGTGNSDHGDTKTNLPVRLEVGDC-SLRLI---- 1347
            |.|:..|           .:||.||...||.||     |||.|:....| ||... .||.:    
plant   463 TAVVTSA-----------GQLFTFGDGTFGVLG-----HGDRKSVFIPR-EVDSLKGLRTVRAAC 510

  Fly  1348 ---HTKFFTNLAVDEQD-------RLFTWGSSPQALRLANQIKRRANAKQKMEENQQRELLSKQL 1402
               ||.....:.|....       :|||||...:: ||.:..|                      
plant   511 GVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKS-RLGHGDK---------------------- 552

  Fly  1403 EATLLPAPIPSTSTLVEPTTSYAAVVAGSTPKSSVSDTKDCQDVQNEAAPSDATETIAPASAKAA 1467
            |..|:|..:   :.||||  ::..|..|.                        :.|:|..::   
plant   553 EPKLVPTCV---AALVEP--NFCQVACGH------------------------SLTVALTTS--- 585

  Fly  1468 PPPVPVASPPVLVPEPDP-TEHLTPHLVDTSEVAGRILQISSGLFHFCLISSSCTLYTWGKNLEH 1531
             ..|.....||.....:| .:...|..||.......:.:|:.|.:|..:::|...:|||||....
plant   586 -GHVYTMGSPVYGQLGNPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNG 649

  Fly  1532 QLGTEDKDRRAVLKPSPIDSI--ERPMYVDCGSDFTLVMTTDHVVRAFGGNSNGQCGRDLGP-SV 1593
            :||..|.|.|.  .|:.::|:  ::...:.|||:||..:.   :.:...|.....|.....| :.
plant   650 RLGHGDADDRN--SPTLVESLKDKQVKSIACGSNFTAAVC---LHKWASGMDQSMCSGCRQPFNF 709

  Fly  1594 ERMRQR------VVC-------------LPATKRLVRFESQCVEVPVEINLPRPRIRLDQDPVRY 1639
            :|.|..      |.|             .|...:..|...:|..        :.:..::.||   
plant   710 KRKRHNCYNCGLVFCHSCSNKKSLKACMAPNPNKPYRVCDRCFN--------KLKKAMETDP--- 763

  Fly  1640 LKVMPPYQPHFLQPANISFDQHCSVGTPNYKSSTEHAATGQDSDDMLSSLENLSQND-ASFSYNA 1703
                               ..|.|:      |..|....|.|:.|....|:..|... |.||...
plant   764 -------------------SSHSSL------SRRESVNQGSDAIDRDEKLDTRSDGQLARFSLLE 803

  Fly  1704 PVLG-DAHSSLDMDYTPEEQSYVPLP 1728
            |:.. |:.|..:..|........|:|
plant   804 PMRQVDSRSKKNKKYEFNSSRVSPIP 829

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
caNP_733309.3 ATS1 1181..1587 CDD:444065 109/426 (26%)
AT5G19420NP_001190338.1 PH_PLC_plant-like 57..164 CDD:270171
ATS1 351..686 CDD:444065 109/410 (27%)
FYVE 690..757 CDD:426221 10/74 (14%)
Tropomyosin_1 <915..959 CDD:403808
BRX_N 949..982 CDD:404581
BRX_assoc 990..1058 CDD:406921
BRX 1064..1119 CDD:429960
Blue background indicates that the domain is not in the aligned region.

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