DRSC/TRiP Functional Genomics Resources

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Protein Alignment ca and AT5G16040

DIOPT Version :10

Sequence 1:NP_733309.3 Gene:ca / 43518 FlyBaseID:FBgn0000247 Length:1961 Species:Drosophila melanogaster
Sequence 2:NP_197108.1 Gene:AT5G16040 / 831461 AraportID:AT5G16040 Length:396 Species:Arabidopsis thaliana


Alignment Length:472 Identity:102/472 - (21%)
Similarity:160/472 - (33%) Gaps:175/472 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly  1203 QLGIGRHMQMALQPMLVTALDGMNITMLEAGQYHNAAVA-DGKLYMWGWGIYGQLGQ-GSCENIA 1265
            |||:|...:..| ..:|.||:..|:..:..|..::.|:. ||||:.|||...|.||. ...:..:
plant    17 QLGLGTDEEKEL-ASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTES 80

  Fly  1266 TPQLVSFFKFKKILQISLGHAHTLVL----------------CGAPNSHMEA-----------NH 1303
            ||.||......||:|.::|..|.|.:                ||...|..|.           ..
plant    81 TPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKR 145

  Fly  1304 CGNELFV----FGSNHF------GQLGTGNS--DHGDTK-TNLPVRLEVGDCSLRLIHTKFFTNL 1355
            |..:|.|    .|..|.      |.:.|...  ..||.| .::|||:: |..::|||....|.||
plant   146 CAQQLTVRQVAAGGTHSVVLTREGYVWTWGQPWPPGDIKQISVPVRVQ-GLENVRLIAVGAFHNL 209

  Fly  1356 AVDEQDRLFTWGSSPQALRLANQIKRRANAKQKMEENQQRELLSKQLEATLLPAPIPSTSTLVEP 1420
            |:.|...|:.||::                                                   
plant   210 ALKEDGTLWAWGNN--------------------------------------------------- 223

  Fly  1421 TTSYAAVVAGST-PKSSVSDTKDCQDVQNEAAPSDATETIAPASAKAAPPPVPVASPPVLVPEPD 1484
              .|..:..|.| |:|.                                 |:||..         
plant   224 --EYGQLGTGDTQPRSY---------------------------------PIPVQG--------- 244

  Fly  1485 PTEHLTPHLVDTSEVAGRILQISSGLFHFCLISSSCTLYTWGKNLEHQLGTEDKDRRAVLKPSPI 1549
             .:.||  |||          |::|.:|...:::...:|.||:....:||..|.|:.:.:.|..:
plant   245 -LDDLT--LVD----------IAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKV 296

  Fly  1550 DSI--ERPMYVDCGSDFTLVMTTDHVVRAFGGNSNGQCGRDLGPSVERMRQRVVCLPATKRLVRF 1612
            :.:  |..:.|.||...::.:|.|..:.:||...:|:.|  .|..|.                  
plant   297 NLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLG--YGRKVT------------------ 341

  Fly  1613 ESQCVEVPVEINLPRPR 1629
            ..|.:|:|:.|..|..|
plant   342 TGQPLELPIHIPPPEGR 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
caNP_733309.3 ATS1 1181..1587 CDD:444065 93/428 (22%)
AT5G16040NP_197108.1 ATS1 6..345 CDD:444065 96/457 (21%)
RCC1 320..385 CDD:395335 13/59 (22%)

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