DRSC/TRiP Functional Genomics Resources

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Protein Alignment ca and AT3G02510

DIOPT Version :9

Sequence 1:NP_001287593.1 Gene:ca / 43518 FlyBaseID:FBgn0000247 Length:1961 Species:Drosophila melanogaster
Sequence 2:NP_186900.3 Gene:AT3G02510 / 821100 AraportID:AT3G02510 Length:393 Species:Arabidopsis thaliana


Alignment Length:515 Identity:107/515 - (20%)
Similarity:175/515 - (33%) Gaps:195/515 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly  1138 WGSS-----GIPSYYSAQKSTEPPEPAHAVKSLDLLSQLNLQVHAIKCGRQHTLILTNNG-LYSL 1196
            |||.     ||       .:.|..|.|..|::|:..|     |.::..|.:::|.:.::| :::.
plant    10 WGSGEDGQLGI-------GTNEEKEWACVVEALEPYS-----VRSVVSGSRNSLAICDDGTMFTW 62

  Fly  1197 GNNNLCQLGIGRHMQMALQPMLVTALDGMNITMLEAGQYHNAAVAD-GKLYMWGWGIYGQLGQGS 1260
            |.|....||.....:....|..|.||..:.||....|.:|..||.| |:.|.||...|||.|:..
plant    63 GWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEP 127

  Fly  1261 CEN--------------IATPQLVSFFKFKKILQISLGHAHTLVLCGAPNSHMEANHCGNELFVF 1311
            .::              ...|:|.       :.|::.|..|::||                    
plant   128 LKDEMGRPVRRDIVIPKRCAPKLT-------VRQVAAGGTHSVVL-------------------- 165

  Fly  1312 GSNHFGQLGTGNS--DHGDTK-TNLPVRLEVGDCSLRLIHTKFFTNLAVDEQDRLFTWGSSPQAL 1373
              ...|.:.|...  ..||.| .::|||:: |..::|||....|.|||::|..||..||::    
plant   166 --TREGHVWTWGQPWPPGDIKQISVPVRVQ-GLENVRLIAVGAFHNLALEEDGRLLAWGNN---- 223

  Fly  1374 RLANQIKRRANAKQKMEENQQRELLSKQLEATLLPAPIPSTSTLVEPTTSYAAVVAGSTPKSSVS 1438
                                                             .|..:..|.|..:|  
plant   224 -------------------------------------------------EYGQLGTGDTQPTS-- 237

  Fly  1439 DTKDCQDVQNEAAPSDATETIAPASAKAAPPPVPVASPPVLVPEPDPTEHLTPHLVDTSEVAGRI 1503
                                          .||||..          .:.||  |||        
plant   238 ------------------------------HPVPVQG----------LDDLT--LVD-------- 252

  Fly  1504 LQISSGLFHFCLISSSCTLYTWGKNLEHQLGTEDKDRRAVLKPSPIDSI--ERPMYVDCGSDFTL 1566
              |::|.:|...::....:|.||:....:||..|.|:.:.:.|..::.:  |..:.|.||...::
plant   253 --IAAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSV 315

  Fly  1567 VMTTDHVVRAFGGNSNGQCGRDLGPSVERMRQRVVCLPATKRLVRFESQCVEVPVEINLP 1626
            .:|.|..:.:||...:|:.|  .|..|.                  ..|.:|:|::|..|
plant   316 ALTRDGRIFSFGRGDHGRLG--YGRKVT------------------TGQPLELPIKIPPP 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
caNP_001287593.1 ATS1 1158..1588 CDD:227511 93/450 (21%)
RCC1_2 1175..1200 CDD:290274 5/25 (20%)
RCC1 1193..1240 CDD:278826 12/46 (26%)
RCC1 1242..1291 CDD:278826 14/63 (22%)
RCC1_2 1503..1532 CDD:290274 6/28 (21%)
RCC1 1522..1568 CDD:278826 12/47 (26%)
RCC1_2 1558..1584 CDD:290274 7/25 (28%)
AT3G02510NP_186900.3 ATS1 6..387 CDD:227511 107/515 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5184
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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