DRSC/TRiP Functional Genomics Resources

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Protein Alignment ca and AT3G15430

DIOPT Version :10

Sequence 1:NP_733309.3 Gene:ca / 43518 FlyBaseID:FBgn0000247 Length:1961 Species:Drosophila melanogaster
Sequence 2:NP_566512.1 Gene:AT3G15430 / 820782 AraportID:AT3G15430 Length:488 Species:Arabidopsis thaliana


Alignment Length:513 Identity:109/513 - (21%)
Similarity:180/513 - (35%) Gaps:173/513 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  1098 LSNFRINYEDNQFAIESSRFK-PISAGCAYCACVVDGTAYFWG--SSGIPSYYS------AQKST 1153
            |.:|..:.|.:...:|:|:.| .|:.|..:...:.:...|..|  .||:.::.|      |....
plant    93 LFSFLQSVEQSSDMVETSQGKMQIATGKYHTLLINNSKVYSCGVSLSGVLAHGSETTQCVAFTPI 157

  Fly  1154 EPPEPAHAVKSLDLLSQLNLQVHAIKCGRQHTLILTNNG-LYSLGNNNLCQLGIGRHMQMA---L 1214
            |.|.||              ||..:...:.|:..:..:| :.:.|:|:....|   |:..:   .
plant   158 EFPFPA--------------QVAQVSATQNHSAFVLQSGQVLTCGDNSSHCCG---HLDTSRPIF 205

  Fly  1215 QPMLVTALDGMNITMLEAGQYHNAAVA-DGKLYMWGWGIYGQLGQGSCENIATPQLVSFFK-FKK 1277
            :|.||.||.|.....:.||.:....:: :|..|..|...:||||.|...:...|::|.|.| ...
plant   206 RPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGP 270

  Fly  1278 ILQISLGHAHTLVLCGAPNSHMEANHCGNELFVFGSNHFGQLGTGNSDHGDTKTNLP-------- 1334
            ::||:.|.::.|.:..           ...::.|||.....||     ||:.:..|.        
plant   271 VVQIAAGPSYVLAVTQ-----------DGSVYSFGSGSNFCLG-----HGEQQDELQPRVIQAFK 319

  Fly  1335 ------VRLEVGDCSLRLIHTKFFTNLAVDEQDRLFTWGS---------------SPQAL-RLAN 1377
                  :|:..||     .|.     :|:|...|::|||.               :||.| .|.|
plant   320 RKGIHILRVSAGD-----EHA-----VALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNN 374

  Fly  1378 QIKRRANAKQKMEENQQRELLSKQLEATLLPAPIPSTSTLVEPTTSYAAVVAG----STPKSSVS 1438
            .:..:..|:::                        .|..|||....|.....|    ..|...||
plant   375 CLAVQVCARKR------------------------KTFVLVEGGLLYGFGWMGFGSLGFPDRGVS 415

  Fly  1439 DTKDCQDVQNEAAPSDATETIAPASAKAAPPPVPVASPPVLVPEPDPTEHLTPHLVDTSEVAGRI 1503
            |                                .|..|.||       |.|.||         |:
plant   416 D--------------------------------KVLRPRVL-------ECLKPH---------RV 432

  Fly  1504 LQISSGLFHFCLISSSCTLYTWGKNLEHQLGTEDKDRRAVLKPSPIDSIERPMYVDCG 1561
            .|:|:||:|..:::....::.:|.|...|||.:  ..|..|:|:.|       ::.||
plant   433 SQVSTGLYHTIVVTQRGRIFGFGDNERAQLGHD--SLRGCLEPTEI-------FLHCG 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
caNP_733309.3 ATS1 1181..1587 CDD:444065 89/421 (21%)
AT3G15430NP_566512.1 F-box 10..58 CDD:425796
ATS1 115..474 CDD:444065 99/475 (21%)
Blue background indicates that the domain is not in the aligned region.

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