DRSC/TRiP Functional Genomics Resources

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Protein Alignment ca and rcbtb2

DIOPT Version :10

Sequence 1:NP_733309.3 Gene:ca / 43518 FlyBaseID:FBgn0000247 Length:1961 Species:Drosophila melanogaster
Sequence 2:XP_005173422.1 Gene:rcbtb2 / 794652 ZFINID:ZDB-GENE-071016-3 Length:527 Species:Danio rerio


Alignment Length:279 Identity:83/279 - (29%)
Similarity:122/279 - (43%) Gaps:43/279 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly  1107 DNQFAIESSRF------KPIS----AGCAYCACVVDGTAYFWGSSGIPSYYSAQKSTEPPEPAHA 1161
            |.|..||..|.      |.||    .|........||..|.||.:|   |......|.......|
Zfish    58 DTQSTIEPRRIDILCGKKIISLSYGTGPHVVIATADGEVYAWGHNG---YSQLGNGTTNHGLTPA 119

  Fly  1162 VKSLDLLSQLNLQVHAIKCGRQHTLILTNNG-LYSLGNNNLCQLGIGRHMQMALQPMLVTALDGM 1225
            :.|.:|:.:   :|..:.||..||:.||.:| :|:.|.||..|:|.|..........:.:.|...
Zfish   120 LVSTNLIGK---RVTEVSCGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNK 181

  Fly  1226 NITMLEAGQYHNAAVAD-GKLYMWGWGIYGQLGQGSCENIATPQLVSFFKFKKILQISLGHAHTL 1289
            .:..:..||..:.||.| |:.|.||:...||||.|:..|..||..::..:...|:|::.|:||||
Zfish   182 VVVNIACGQLCSMAVLDNGETYGWGYNCNGQLGLGNNGNQQTPCRIAALQGINIIQVACGYAHTL 246

  Fly  1290 VLCGAPNSHMEANHCGNELFVF--GSNHFGQLGTGNSDHGDTKTNLPV----RLEVGDCSLRLIH 1348
            .|.             :|.||:  |:|.:|||||||..:....|.:.:    .:||..|     |
Zfish   247 ALT-------------DEGFVYSWGANSYGQLGTGNKSNQAVPTLINMDKERMVEVAAC-----H 293

  Fly  1349 TKFFTNLAVDEQDRLFTWG 1367
            |. .|:.|..:..::..||
Zfish   294 TS-HTSAAKTQSGQVLMWG 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
caNP_733309.3 ATS1 1181..1587 CDD:444065 61/195 (31%)
rcbtb2XP_005173422.1 ATS1 37..>312 CDD:444065 83/279 (30%)
BTB_POZ_RCBTB2_CHC1L 350..466 CDD:349663
BACK_RCBTB2 463..527 CDD:350604
Blue background indicates that the domain is not in the aligned region.

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