DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ca and AT4G14368

DIOPT Version :10

Sequence 1:NP_733309.3 Gene:ca / 43518 FlyBaseID:FBgn0000247 Length:1961 Species:Drosophila melanogaster
Sequence 2:NP_001154232.2 Gene:AT4G14368 / 7922506 AraportID:AT4G14368 Length:1106 Species:Arabidopsis thaliana


Alignment Length:1078 Identity:222/1078 - (20%)
Similarity:347/1078 - (32%) Gaps:360/1078 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   827 ALMQLSAMALKSTYLLRSRYLGHPLLKGILGDITYRHSEDVRVILPEKHEEEDVNSGVFCSDYHY 891
            ||:.|.    |.|.||:....|.|..:      ::|.|.|...:....|.||             
plant    22 ALVSLK----KGTQLLKYSRKGRPKFR------SFRLSPDETTLFWLSHGEE------------- 63

  Fly   892 GVDESISALQMSPSSQFHLANLLLITLAEKAVNDKNYI-PLWNFLVTNSKYHTNMTSIVLCQSGL 955
                          ....||.:..|...::....:.|: |..::|..:..||....|:.|     
plant    64 --------------KGLKLATVSRILPGQRTAVFRRYLRPEKDYLSFSLIYHNGDRSLDL----- 109

  Fly   956 FSSAIILAKIRGVCLDTFNALISVVAQEFGWYNELNVCLYNLSENIFLETITYLPHVSMDYFAFI 1020
                        :|.|.        |:...|:..|...   :.:|...:..:.:|.||:      
plant   110 ------------ICKDK--------AETEVWFAGLKSL---IRQNRNKQAKSEIPEVSI------ 145

  Fly  1021 QEKLHHIRPCVLQRLSKQLNPFSPALRPIVSHNSDCAMSNDNNPQLFEFCKSLIETYLAVLIHME 1085
                                           |:|||..:...:....:|..:          :..
plant   146 -------------------------------HDSDCFSTGRPSTASIDFAPN----------NTR 169

  Fly  1086 SQRVKYD-SIVNALSNF---RINYE-DNQFAIESSRFKPISAGCAYCACVVD--------GTAYF 1137
            ..|...| .|.|:.:.|   .:.|| .|.....:..|:...:....|:....        |..|.
plant   170 RGRTSIDLGIQNSPTKFGSSDVGYERGNMLRPSTDGFRISVSSTPSCSTGTSGPDDIESLGDVYV 234

  Fly  1138 WG---SSGIPSYYSAQKSTEPPEPAHAVKS----LDLL------SQLNLQVHAIKCGRQHTLILT 1189
            ||   |.||             .|...|.|    :|:|      |.:.|.||.|.||.:|..::|
plant   235 WGEVWSDGI-------------SPDGVVNSTTVKIDVLIPKPLESNVVLDVHQIACGVRHIALVT 286

  Fly  1190 NNG-LYSLGNNNLCQLGIGRHMQMALQPMLVTALDGMNITMLEAGQYHNAAVA-DGKLYMWGWGI 1252
            ..| :::.......:||.|..:.:. :|.||..|...||..:..|:||..||: .|.|:.||.||
plant   287 RQGEVFTWEEEAGGRLGHGIQVDVC-RPKLVEFLALTNIDFVACGEYHTCAVSTSGDLFTWGDGI 350

  Fly  1253 Y--GQLGQGSCENIATPQLVSFFKFKKILQISLGHAHTL----VLCGAPNSHMEANHCGNELFVF 1311
            :  |.||.||..:...|:.||            |....|    |.||..:|.:..  ...:||.|
plant   351 HNVGLLGHGSDLSHWIPKRVS------------GPVEGLQVLSVACGTWHSALAT--ANGKLFTF 401

  Fly  1312 GSNHFGQLGTGNSDHGDTKT-NLP--VRLEVGDCSLRLIHTKFFTNLAVDEQD---------RLF 1364
            |...||.||     |||.:: :.|  |::..|..:|::....:.|...|:..:         :||
plant   402 GDGAFGVLG-----HGDRESVSYPKEVKMLSGLKTLKVACGVWHTVAIVEVMNQTGTSTSSRKLF 461

  Fly  1365 TWGSSPQALRLANQIKRRANAKQKMEENQQRELLSKQLEATLLPAPIPS-------------TST 1416
            |||...         |.|.....|              |..|||..:.|             |.|
plant   462 TWGDGD---------KNRLGHGNK--------------ETYLLPTCVSSLIDYNFNQIACGHTFT 503

  Fly  1417 LVEPTTSYAAVVAGSTP---KSSVSDTKDCQDVQNEAAPSDATETIAPASAKAAPPPVPVASPPV 1478
            :...|:.:...:.|::.   .||.||.|                                     
plant   504 VALTTSGHVFTMGGTSHGQLGSSNSDGK------------------------------------- 531

  Fly  1479 LVPEPDPTEHLTPHLVDTSEVAGRILQISSGLFHFCLISSSCTLYTWGKNLEHQLGTEDKDRRAV 1543
                       .|.||....|...:.:||.|..|..:::|...::||||....:||..|||.|..
plant   532 -----------LPCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGDKDDRKT 585

  Fly  1544 LKPSPIDSI-ERPM-YVDCGSDFT-------LVMTTDHVV-----RAFG----GNSNGQCG---- 1586
              |:.:::: ||.: .:.|||:||       .|...|..|     :|||    .::...||    
plant   586 --PTLVEALRERHVKSISCGSNFTSSICIHKWVSGADQSVCSGCRQAFGFTRKRHNCYNCGLVHC 648

  Fly  1587 ----------RDLGPSVERMRQRVVCLPATKRLVRFESQCVEVPVEINLPRPRIRLD-------- 1633
                      ..|.|:..:..:  ||.....:|...||.........|...|...||        
plant   649 HACSSKKALKAALAPTPGKPHR--VCDACYTKLKAGESGYNSNVANRNSTTPTRSLDGTGRPDRD 711

  Fly  1634 -----------QDPVRYLKVMPPYQ----------PHFLQPANISFDQHCSVGTPNYK----SST 1673
                       .:||:|.:|.....          |...|..:::|....|.....:|    |||
plant   712 IRSSRILLSPKTEPVKYSEVRSSRSESSIVRASQVPALQQLRDVAFPSSLSAIQNAFKPVASSST 776

  Fly  1674 EHAATGQDSDDMLSSLENLSQNDASFSYN-APVLGDAHSSLDMDYTPEEQSYVPLPEQAVGSGMP 1737
            ....:|..|..:.|     ....:.||.. ...|..::..::.:.|..:.....|.|:....|..
plant   777 STLPSGTRSSRISS-----PPRSSGFSRGMIDTLKKSNGVINKEMTKLQSQIKNLKEKCDNQGTE 836

  Fly  1738 ANAEQLLGRDDDD-----GSTYTQSTEGMGESSLQHLR 1770
            ....:...|:..|     .|.:..:||.| :|..:|||
plant   837 IQRLKKTAREASDLAVKHSSKHKAATEVM-KSVAEHLR 873

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
caNP_733309.3 ATS1 1181..1587 CDD:444065 112/473 (24%)
AT4G14368NP_001154232.2 PH_PLC_plant-like 17..128 CDD:270171 30/170 (18%)
ATS1 274..607 CDD:444065 104/425 (24%)
FYVE 613..680 CDD:214499 12/68 (18%)
BRX_N 853..889 CDD:404581 8/22 (36%)
BRX 964..>994 CDD:429960
Blue background indicates that the domain is not in the aligned region.

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