Sequence 1: | NP_001287593.1 | Gene: | ca / 43518 | FlyBaseID: | FBgn0000247 | Length: | 1961 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001348895.1 | Gene: | Herc3 / 73998 | MGIID: | 1921248 | Length: | 1050 | Species: | Mus musculus |
Alignment Length: | 499 | Identity: | 101/499 - (20%) |
---|---|---|---|
Similarity: | 161/499 - (32%) | Gaps: | 213/499 - (42%) |
- Green bases have known domain annotations that are detailed below.
Fly 1137 FW--GSSGIPSYYSAQKSTEPPEPAHAVKSLDLLSQLNLQVHAIKCGRQHTLILTNNG-LYSLGN 1198
Fly 1199 NNLCQLGIGRHMQMALQPMLVTALDGMNITMLEAGQYHNAAVAD-GKLYMWGWGIYGQLGQGSCE 1262
Fly 1263 -NIATPQLVSFFKFKKILQISLGHAHTLVLCGAPNSHMEANHCGNELFVFGSNHFGQLGTGNSDH 1326
Fly 1327 GDTKTNLPVRLEVGDCSLRLIHTKFFTNLAVDEQDRLFTWGSSPQALRLANQIKRRANAKQKMEE 1391
Fly 1392 NQQRELLSKQLEATLLPAPIPSTSTLVEPTTSYAAVVAGSTPKSSVSDTKDCQDVQNEAAPSDAT 1456
Fly 1457 ETIAPASAKAAPPPVPVASPPVLVPEPDPTEHLTPHLVDTSEVAGRILQISSGLFHFCLISSSCT 1521
Fly 1522 LYTWGKNLEHQLG-TEDKDRRAVLKPSPIDSI--ERPMYVDCGSDFTLVMTTDHVVRAFGGNSNG 1583
Fly 1584 QCGRD--------------LGPSVERM---RQRVVCLPATKRLV 1610 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ca | NP_001287593.1 | ATS1 | 1158..1588 | CDD:227511 | 87/435 (20%) |
RCC1_2 | 1175..1200 | CDD:290274 | 7/25 (28%) | ||
RCC1 | 1193..1240 | CDD:278826 | 13/46 (28%) | ||
RCC1 | 1242..1291 | CDD:278826 | 21/50 (42%) | ||
RCC1_2 | 1503..1532 | CDD:290274 | 8/28 (29%) | ||
RCC1 | 1522..1568 | CDD:278826 | 14/48 (29%) | ||
RCC1_2 | 1558..1584 | CDD:290274 | 9/25 (36%) | ||
Herc3 | NP_001348895.1 | ATS1 | 2..331 | CDD:227511 | 101/499 (20%) |
RCC1 | 313..377 | CDD:366085 | 1/4 (25%) | ||
HECTc | 702..1048 | CDD:238033 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |