Sequence 1: | NP_001287593.1 | Gene: | ca / 43518 | FlyBaseID: | FBgn0000247 | Length: | 1961 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001347539.1 | Gene: | Rcbtb1 / 71330 | MGIID: | 1918580 | Length: | 531 | Species: | Mus musculus |
Alignment Length: | 289 | Identity: | 79/289 - (27%) |
---|---|---|---|
Similarity: | 121/289 - (41%) | Gaps: | 45/289 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 1101 FRINYE------DNQF--------AIESSRFKPISAGCA--YCACVVDGTAYFWGSSGIPSYYSA 1149
Fly 1150 QKSTEPPEPAHAVKSLDLLSQLNLQVHAIKCGRQHTLILTNNG-LYSLGNNNLCQLGIGRHMQMA 1213
Fly 1214 LQPMLVTALDGMNITMLEAGQYHNAAVAD-GKLYMWGWGIYGQLGQGSCENIATPQLVSFFKFKK 1277
Fly 1278 ILQISLGHAHTLVLCGAPNSHMEANHCGNELFVFGSNHFGQLGTGNSDHGDTKTNLPVR----LE 1338
Fly 1339 VGDCSLRLIHTKFFTNLAVDEQDRLFTWG 1367 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ca | NP_001287593.1 | ATS1 | 1158..1588 | CDD:227511 | 62/216 (29%) |
RCC1_2 | 1175..1200 | CDD:290274 | 8/25 (32%) | ||
RCC1 | 1193..1240 | CDD:278826 | 10/46 (22%) | ||
RCC1 | 1242..1291 | CDD:278826 | 21/49 (43%) | ||
RCC1_2 | 1503..1532 | CDD:290274 | |||
RCC1 | 1522..1568 | CDD:278826 | |||
RCC1_2 | 1558..1584 | CDD:290274 | |||
Rcbtb1 | NP_001347539.1 | RCC1 1 | 40..91 | 10/44 (23%) | |
ATS1 | 43..>316 | CDD:227511 | 79/289 (27%) | ||
RCC1 2 | 93..145 | 16/57 (28%) | |||
RCC1 3 | 147..198 | 13/50 (26%) | |||
RCC1 4 | 199..250 | 21/50 (42%) | |||
RCC1 5 | 252..302 | 16/55 (29%) | |||
RCC1 6 | 304..356 | 2/8 (25%) | |||
BTB_POZ_RCBTB1_CLLD7 | 350..466 | CDD:349662 | |||
BACK_RCBTB1 | 466..531 | CDD:350603 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167833513 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
4 | 3.800 |