| Sequence 1: | NP_001287593.1 | Gene: | ca / 43518 | FlyBaseID: | FBgn0000247 | Length: | 1961 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_080268.1 | Gene: | Herc6 / 67138 | MGIID: | 1914388 | Length: | 1003 | Species: | Mus musculus |
| Alignment Length: | 461 | Identity: | 103/461 - (22%) |
|---|---|---|---|
| Similarity: | 159/461 - (34%) | Gaps: | 193/461 - (41%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1146 YYS-AQKSTEPPEPAHAVKSLDLLSQLNLQVHAIKCGRQHTLIL-TNNGLYSLGNNNLCQLGIGR 1208
Fly 1209 HMQMALQPMLVTALDGMNITMLEAGQYHNAAVA-DGKLYMWGWGIYGQLGQGSCENIA-TPQLVS 1271
Fly 1272 FFKFKKILQISLGHAHTLVLCGAPNSHMEANHCGNELFVFGSNHFGQLGTGNSDHGDTKTNLPVR 1336
Fly 1337 LEVGDCSLRLIHTKFFTNLAVDEQDRLFTWGSSPQALRLANQIKRRANAKQKMEENQQRELLSKQ 1401
Fly 1402 LEATLLPAPIPSTSTLVEPTTSYAAVVAGSTPKSSVSDTKDCQDVQNEAAPSDATETIAPASAKA 1466
Fly 1467 APPPVPVASPPVLVPEPDPTEHLTPHLVDTSEVAGRILQISSGLFHFCLISSSCTLYTWGKNLEH 1531
Fly 1532 QLG-TEDKDRRAVLKPSPIDSIER--PMYVDCGSDFTLVMTTDHVVRAFGGNSNGQCGRDLGPSV 1593
Fly 1594 ERMRQR 1599 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| ca | NP_001287593.1 | ATS1 | 1158..1588 | CDD:227511 | 92/435 (21%) |
| RCC1_2 | 1175..1200 | CDD:290274 | 8/25 (32%) | ||
| RCC1 | 1193..1240 | CDD:278826 | 14/46 (30%) | ||
| RCC1 | 1242..1291 | CDD:278826 | 20/49 (41%) | ||
| RCC1_2 | 1503..1532 | CDD:290274 | 8/28 (29%) | ||
| RCC1 | 1522..1568 | CDD:278826 | 13/48 (27%) | ||
| RCC1_2 | 1558..1584 | CDD:290274 | 11/25 (44%) | ||
| Herc6 | NP_080268.1 | RCC1 1 | 40..91 | 17/51 (33%) | |
| RCC1 | 40..89 | CDD:278826 | 15/49 (31%) | ||
| RCC1 2 | 92..144 | 21/58 (36%) | |||
| RCC1 | 92..142 | CDD:278826 | 20/49 (41%) | ||
| RCC1 | 145..195 | CDD:278826 | 22/214 (10%) | ||
| RCC1 3 | 146..197 | 22/215 (10%) | |||
| RCC1_2 | 183..211 | CDD:290274 | 9/57 (16%) | ||
| RCC1 4 | 199..252 | 15/52 (29%) | |||
| RCC1_2 | 237..266 | CDD:290274 | 12/28 (43%) | ||
| RCC1 5 | 253..303 | 14/29 (48%) | |||
| RCC1 | 253..300 | CDD:278826 | 14/29 (48%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 261..281 | 11/21 (52%) | |||
| chaperonin_like | <570..>652 | CDD:295468 | |||
| HECTc | 658..999 | CDD:238033 | |||
| HECTc | 682..999 | CDD:214523 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.010 | |||||