DRSC/TRiP Functional Genomics Resources

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Protein Alignment ca and LOC567670

DIOPT Version :9

Sequence 1:NP_001287593.1 Gene:ca / 43518 FlyBaseID:FBgn0000247 Length:1961 Species:Drosophila melanogaster
Sequence 2:XP_021324683.1 Gene:LOC567670 / 567670 -ID:- Length:4796 Species:Danio rerio


Alignment Length:2419 Identity:423/2419 - (17%)
Similarity:735/2419 - (30%) Gaps:955/2419 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 ARLQEGEEEEPLGHDLPEHMLVRNSGTEDAVQPLPQQQQTIDTTGNSQVMAASFMASKTCPYPLS 229
            :||||...:        ||   ::|||..:.||:.:...::..                      
Zfish  2544 SRLQEDGSK--------EH---KDSGTHSSSQPVSKSSSSVSL---------------------- 2575

  Fly   230 VVWWKTNSGQNRAIIGYSDGSICFVGLSPN--------CPMIASTAIEN-------GSVMRLVIC 279
                .:|..:..||.|.|        .||:        ...:.:..:||       ..:.|:|:.
Zfish  2576 ----YSNGSEGTAIFGQS--------ASPSTNDLTASLLTALQADGLENFNPFLPINLLQRMVLA 2628

  Fly   280 KDKAYDGVM--------LLITSS------LKQQYKLL---------LEQK-------------AI 308
            :.....|::        |.:|||      .:||...|         :||.             ::
Zfish  2629 RFPTLAGLVHSPVLPPGLSLTSSASCEGFTEQQTSFLEPCGQTRTPVEQPQMFVPVRLLEMGFSM 2693

  Fly   309 KYVY--------PGDSSPTTRE--GAWQIVMSVQDKHQSAATGARQSNSSDPASDSSQLEEDVFA 363
            :::|        .|:....|.|  .:|.:...:.:: |.|..|:....::|  :.||:..|.|..
Zfish  2694 RHIYRAMEAAGVTGEVDSRTIEVLASWMLEHPIAEE-QQAGEGSSTGGATD--TPSSEGPETVQC 2755

  Fly   364 PPS-----------SDDVVCSG------------------PGAANSDPSTVSASAEAATADVP-P 398
            |.|           .:|.:.:|                  |..|....|.|........||.| |
Zfish  2756 PESPAPLTLQDSREPNDSLLAGLDLVERENFLDVHLTRNRPPPARRQRSGVGQRTSFRRADSPSP 2820

  Fly   399 PPAPPSYSEAV---------------ARQSGDQGGVRFQQQQLP--------------------- 427
            .|.|..|.:.|               |.:..:.|.:....|:.|                     
Zfish  2821 SPVPALYRQEVGVAEWPERAETHPFAAEEDSELGYMDDPYQEEPYEELLTPEFITSERDTLWMVE 2885

  Fly   428 ------------------------------------------------------------AGSMD 432
                                                                        :||..
Zfish  2886 GREEHPEPHEMVECELCNTLTLQFNNHMKRHHPGCGQSAGRRGYRSNGAYVDGWFGGECGSGSPY 2950

  Fly   433 GILPAT-RARLASLKSLG--SKKLQAIKMRLSDQRQKFDEFMPD---------------STMGSF 479
            .:|.:| |.:..:| ::|  |.|....|..:||...:.|....|               :.:..|
Zfish  2951 YLLCSTCREKYLAL-NMGVMSSKQDRAKGLVSDLIGQLDSTSEDEWDPVNQEDSDSDRLTGLEDF 3014

  Fly   480 AIMDSP------SVTPEPLGTT---------SGSFYNIQNLRSTFLLSA-LHSNSHSLTVHSIDI 528
            .|:..|      ...|||:..|         ||:....:||....::|. |.|:|..|::.....
Zfish  3015 GILLRPLGLSEKKPVPEPIPFTEHDPLGALVSGAGSGGENLLYRGVVSTELKSSSAPLSLGEQAA 3079

  Fly   529 SLKP----LFVYKIPKHTQEILISSNILYGIHYVDLHCRSDSDHFTAASLLDDPLVANTEKENRD 589
            ||:.    |...:....|.:||::.:::         .|:.|...:::|:.           |:.
Zfish  3080 SLREPQERLLALRRVTSTAQILLAYSMV---------MRALSQTSSSSSVC-----------NQS 3124

  Fly   590 ADIEKVDQSDVS-AQKSDSTSATTTATSSLDQ--------SDMPSTAINAVSVISSAMASLHTSD 645
            :.:|.:..:|:. ..:....:|.....:.:||        ||.|.:|.  :|.:|||:.||.:..
Zfish  3125 SGLEALGLADIRILVRLMCLAAGGRVQTGMDQQGMGRGSASDRPGSAF--LSFLSSAIGSLVSHS 3187

  Fly   646 EDRFNNLAQLGLFRFENETVLHLYQMAQYRNPS--AEPETLTKEEKA-KAFELKDIH--TPMDYI 705
            ...:..|..:        ....|...|...|.|  |:|:..|::..| |...|::..  ||..::
Zfish  3188 PAAYRELVDI--------CTQDLMAAATGMNISAIADPQQRTRQGSALKGMVLQEPRELTPPTFL 3244

  Fly   706 QFYETADVSSE------FSLRQMEIMQSE---FPKINYDPSYVITNKNVYTIQLKKEPFELFLDA 761
            .......:.:|      ::|.:.|.::|:   .|..: .||.......|..::|........|.|
Zfish  3245 VTQSLVSLLTEKGIRYRYNLERSESVESKDGGSPPPS-GPSLSQAGVRVGPLELANALAACVLSA 3308

  Fly   762 ALQNEFNQ--CRDFCNTFDLSFEQ-------CIEFAGDYLLRR---KKI--------------TQ 800
            .|.:...|  .:.......:|.::       ..:.|||  ||:   :|:              .|
Zfish  3309 RLTSRHRQWAAQQLVQALAISEKENTARPQTYSDMAGD--LRKCPVRKLEGHQNRVSSCSWNAEQ 3371

  Fly   801 ALL--------------TYNKARVKPIRT--------------------ALKLAMYGHTYALMQ- 830
            .||              |.|.|.::...|                    |:..:..|...|..| 
Zfish  3372 GLLASGSQDGTVRLWNITPNSAELQHTHTCSISEDAQSSDASMGSHLLSAVSWSAGGTLLAAFQN 3436

  Fly   831 ------------------------LSAMALKSTYLLR--SRYLGHP--LLKGIL-GDITYRH-SE 865
                                    ||.:...:.:|::  |..|..|  ||.|.| |.:.:.. :|
Zfish  3437 KLINIWTVNGTQAHIEAQSSWITALSWVQTSTPFLIQEASSQLNPPESLLVGRLDGSLCWLEVTE 3501

  Fly   866 DVRVILPEK---HEEEDVN-------SGVFCSDYHYG--------------------VDESISAL 900
            |:||...|.   |.:|...       ...|...|..|                    ..||:|||
Zfish  3502 DLRVDRTELMHCHRKEAPQCLAWYSIEKPFAVGYPDGKILLGTAESYETEPPILLTAFPESVSAL 3566

  Fly   901 QMSPSSQFHLANLLLITLAEKAVNDKNYIPLWN-----FLVTNSKYHT----------------- 943
            :..|:     .:|||      :|.....:.:|.     ::..:|.:||                 
Zfish  3567 RWDPT-----GHLLL------SVGRSEVVKIWGRAGGAWVTLHSLFHTGTVNTAEWCPLPGRGAD 3620

  Fly   944 -NMTSIVLCQSGLF--------------------------SSAIILAKIRGV--CLDTFNALISV 979
             .:...|.||:||.                          ||||    .||.  |:...:..|:.
Zfish  3621 PRLMMAVGCQNGLLYVWTVPQGGANVSVPNFLTPSTSQDKSSAI----KRGTAKCMFRLSGHITA 3681

  Fly   980 VAQEFGWYNELNVC----------------LYNLSENIFLETI----------TYLPHVSMDYFA 1018
            |       ..|:.|                :::|.:...|:|:          |::||:.:...:
Zfish  3682 V-------KTLSFCPSGLALVSGGIGGLLNIWSLRDGSVLQTVVTGMGSVVCTTWIPHIGVTACS 3739

  Fly  1019 FIQEKLHHIRPCVLQRLSKQLNPFSPALRPIVS-------HNSDC-AMSNDNNPQLFEFCKSLIE 1075
            ...:.:..|| |....:|:  |....:.|.::.       :.:.| |:..:..|.|.:      |
Zfish  3740 GRSKDVLLIR-CTSDWISQ--NHILASCRSVLRSQGILGLNRAPCMAVFLERLPTLLQ------E 3795

  Fly  1076 TYLAVLIH-MESQRVKYDSIVNALSNFRINYEDNQFAIES------SRFKPISAGC--AYCACVV 1131
            .|.....| |...::.:.:.:.:||:..:....:|.....      |...|:..|.  ::|.   
Zfish  3796 QYNYEKSHVMAGDQLTHSAFLQSLSSLAMGLFLDQLLCRQPKPPHHSGMGPVQDGAHGSFCP--- 3857

  Fly  1132 DGTAYFWGSSGIPSYYSAQKSTEP------------------PEPAHAVKSLD------------ 1166
              :.:.|    :.:|.:..||.|.                  |..|...|.||            
Zfish  3858 --SEWNW----LSTYSTTVKSAEAFARGTPFPEAFIAPEFHHPGAAEFTKPLDNSKWTFMMDEQL 3916

  Fly  1167 -----------------------------------------LLSQLNLQVHAIKCGRQHTLILTN 1190
                                                     |...|: |...:.||:..|.::..
Zfish  3917 MSWATSRPEDWQQGGKSEVYLWGNGRHGQLADAGTSASVPTLAPSLS-QTQQVVCGQNCTFLVQA 3980

  Fly  1191 NG-LYSLGNNNLCQLGIGRHMQMALQPMLVTALDGMNITML---EAGQYHNAAVAD-GKLYMWGW 1250
            || :.::|..:..:||.|....: ..|.:::||.|..:|.|   .....|:.|:.: |:::.||.
Zfish  3981 NGTVLAVGEGSYGRLGQGNSDDL-YTPTIISALQGYVVTQLVTSYGSDGHSLALTETGEVFSWGD 4044

  Fly  1251 GIYGQLGQGSCENIATPQLVSFFKFKKILQISLGHAHTLVLCGAPNSHMEANHCGNELFVFGSNH 1315
            |.||:||.|:.|....|:.:...:.::::|::.|..|:.|:.           ...:||.|||..
Zfish  4045 GDYGKLGHGNSERQRRPKQIEGLQGEEVVQLACGFKHSAVVT-----------ADGKLFTFGSGD 4098

  Fly  1316 FGQLGTGNSDHGDTKTNLPVRL------EVGDCSLRLIHTKFFTNLAVDEQDRLFTW-------- 1366
            .|:||    ....:...:|.|:      .:|..|..:.||      .|...|.|..|        
Zfish  4099 SGRLG----QRSTSNKMIPERVTALDGHHIGQVSCGINHT------LVLSSDGLTVWAFGDGDYG 4153

  Fly  1367 --GSSPQALRLANQIKRRANAKQKMEENQQRELLSKQLEATLLPAPIPSTSTLVEPTTSYAAVVA 1429
              |..|..::.         ..||:|     .|.:|.::.             |...|.::.|:|
Zfish  4154 KLGIGPCTVKC---------YPQKVE-----SLCNKGIKK-------------VGCGTHFSVVLA 4191

  Fly  1430 GSTPKSSVSDTKDCQDVQNEAAPSDATETIAPASAKAAPPPVPVASPPVLVPEPDP--TEHLTPH 1492
                       ||..                          :.......|:..||.  ..|..|.
Zfish  4192 -----------KDGH--------------------------IYTFGQERLIGLPDAMLKNHNRPQ 4219

  Fly  1493 LVDTSEVAGRILQ-ISSGLFHFCLISSSCTLYTWGKNLEHQLGTEDKDRRAVLKPSPIDSIE--R 1554
            ::...|  |..:: |:.|..|...:|::..:|.||.|.|.|||....:  .|.:|..:.:::  .
Zfish  4220 IIPALE--GVFIEDIAVGCEHILALSNTGDVYAWGCNCEAQLGLGHSN--PVKEPILVTTLQGKN 4280

  Fly  1555 PMYVDCGSDFTLVMTTDHVVRAFGGNSNGQCG------------RDLGPSVERMRQRVVCLPATK 1607
            ...:..|...:...||..:.....|.|..|.|            :|..|.|...|.||       
Zfish  4281 IRQISAGRCHSSAWTTPALSTRASGCSGIQLGLPQSVPPQYNALKDCSPEVLNTRLRV------- 4338

  Fly  1608 RLVRFESQCVEVPVEINLPRPRIRLDQDPVRYLKVMPPYQPHFLQPANISFDQHCSVGTPNYKSS 1672
             |..|.          :|.....||                       ::.|....|.|..|.|.
Zfish  4339 -LYHFS----------DLMYKSWRL-----------------------LNLDPRSQVSTSRYSSG 4369

  Fly  1673 TEHAATGQDSDDMLSSLENLSQNDASFSYNAPVLGDAHSSLDM--DYTPE-------------EQ 1722
            |.....||     |..|.:...|      ..|::.....::..  .|.|:             :.
Zfish  4370 TAAIVQGQ-----LRGLLSPKVN------TLPLVRTIGRTMTQGKTYGPQITVKRISTRGRSSKP 4423

  Fly  1723 SYVPLPEQAVGSG-----MPANA--EQLLGRDDDDG-----STYTQ------------------S 1757
            .:|.:.:|.|...     :|:.|  .:|:|...||.     .|.|:                  |
Zfish  4424 IFVQIAKQVVNLNPTELRLPSRAWKVKLVGEGADDAGGVFDDTITEMCQELQSGVVDLLIHTPNS 4488

  Fly  1758 TEGMGESSLQHLRHYIHYCLYAFHGLYNPDKIGECARPHRNEYRIRICMLNFRFVEAFRLCLQSC 1822
            |..:|.::.:.|.:         .|.::.|.|                 :.|||:...      .
Zfish  4489 TADVGSNTDRFLLN---------PGAFSDDHI-----------------VQFRFLGIL------M 4521

  Fly  1823 GSAQRT-----LKLFEYFSKDTGYVPLRRTDLKH---LIYHLCLHFLERKFDMLECERF-FMGDL 1878
            ..|.||     |.|..:..|....:||...||:.   |.|......|.....::..|.| .|..|
Zfish  4522 AVAIRTKKPLDLHLAPWVWKQMCCIPLGAADLEEVDLLTYRSLQGILHLDSSVINEENFTVMIPL 4586

  Fly  1879 DYYLLELA-------------YVFYFNNNNSTLEQNLNQKFKQLIAAADSNQAATSAG------- 1923
            |.::...|             ....|:|.|..:|:.|:.:..::    |...:|...|       
Zfish  4587 DSFVAHSADGTLVPVIPGGHNLPLTFSNRNDYVERALHYRLHEM----DRQVSAVREGMSSIIPV 4647

  Fly  1924 --------QELEQL 1929
                    ::||||
Zfish  4648 PLLSLLTARQLEQL 4661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
caNP_001287593.1 ATS1 1158..1588 CDD:227511 98/520 (19%)
RCC1_2 1175..1200 CDD:290274 6/25 (24%)
RCC1 1193..1240 CDD:278826 11/49 (22%)
RCC1 1242..1291 CDD:278826 14/49 (29%)
RCC1_2 1503..1532 CDD:290274 9/29 (31%)
RCC1 1522..1568 CDD:278826 11/47 (23%)
RCC1_2 1558..1584 CDD:290274 5/25 (20%)
LOC567670XP_021324683.1 RCC1 371..724 CDD:332518
SPRY_HERC1 1975..2131 CDD:293939
UBA_HERC1 2682..2725 CDD:270584 5/42 (12%)
WD40 3351..3707 CDD:330360 63/377 (17%)
WD40 repeat 3362..3400 CDD:293791 6/37 (16%)
WD40 repeat 3420..3451 CDD:293791 4/30 (13%)
WD40 repeat 3458..3512 CDD:293791 16/53 (30%)
WD40 repeat 3520..3557 CDD:293791 3/36 (8%)
WD40 repeat 3563..3587 CDD:293791 8/34 (24%)
WD40 repeat 3606..3653 CDD:293791 5/46 (11%)
WD40 repeat 3682..3718 CDD:293791 6/42 (14%)
RCC1 3869..4282 CDD:332518 95/503 (19%)
HECTc 4408..4776 CDD:238033 52/290 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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