DRSC/TRiP Functional Genomics Resources

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Protein Alignment ca and sergef

DIOPT Version :10

Sequence 1:NP_733309.3 Gene:ca / 43518 FlyBaseID:FBgn0000247 Length:1961 Species:Drosophila melanogaster
Sequence 2:XP_694032.5 Gene:sergef / 565673 ZFINID:ZDB-GENE-061220-11 Length:397 Species:Danio rerio


Alignment Length:427 Identity:104/427 - (24%)
Similarity:156/427 - (36%) Gaps:120/427 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1193 LYSLGNNNLCQLGIG--------RHMQMALQPMLVTALDGMNITMLEAGQYHNAAVAD-GKLYMW 1248
            ||:.|.|:..|||.|        |.::..||...:.|:.|        |..|:|.::| |:|.:.
Zfish    13 LYTWGANSYGQLGQGNAEDQAEPRRVESGLQEEQIRAVTG--------GGGHSALISDSGELLVC 69

  Fly  1249 GWGIYGQLGQGSCENIATPQLVSFFKFKKILQISLGHAHTLVLCGAPNSHMEANHCGNELFVFGS 1313
            |....||||.|....|.|.|......|.::.|:|.|...|::|.|           ...:...||
Zfish    70 GQNHKGQLGLGHTLEIMTFQTCPLPGFGRVQQVSCGWDFTIILTG-----------DGLVLACGS 123

  Fly  1314 NHFGQLGTGNSDHGDTKTNLPVRLE-----VGDCSLRLIHTKFFTNLAVDEQDRLFTWGSSPQAL 1373
            |.|||||....   .|.:..|:.|:     |...:..|.|.     ||......::.||:.    
Zfish   124 NAFGQLGVSAE---KTHSAEPLLLKSFHEPVSSVAAGLRHA-----LASTASGCVYQWGTG---- 176

  Fly  1374 RLANQIKRRANAKQKMEENQQRELLSKQLEATLLPAPIPSTSTLVEP---------TTSYAAVVA 1429
             |::..||..|                       |.|:||..:..||         ||.  .|:|
Zfish   177 -LSSHAKRMLN-----------------------PQPVPSHLSSKEPCLVPGFAHVTTQ--KVIA 215

  Fly  1430 GSTPKSSVSDTKDCQDVQNEAA--PSDATETIAPASAKAAPPPVPVASPPVLVPEPDPTEHLTPH 1492
            ||...:       |..|..:..  .|:....:...|...   |:|||                  
Zfish   216 GSAHCA-------CLTVNGDVFLWGSNKHGQLISGSLFL---PLPVA------------------ 252

  Fly  1493 LVDTSEVAG-RILQISSGLFHFCLISSSCTLYTWGKNLEHQLGTED-------KDRRAVLKPSPI 1549
             :|.|.:.. |:..:.||..|....:.|..::|||::...|||..|       .|...|..|..:
Zfish   253 -LDRSMLQDERVSDVHSGWTHLIAQTESGRVFTWGRSNYGQLGQTDHSMEKQSSDEHLVRSPVEV 316

  Fly  1550 DSIERPMYVDCGSDFTLVMTTDHVVRAFGGNSNGQCG 1586
            .::.....:.|||:..|.:....|. ::|.|.:|.||
Zfish   317 KALFGATQISCGSEHNLAVVGGRVF-SWGWNEHGMCG 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
caNP_733309.3 ATS1 1181..1587 CDD:444065 104/427 (24%)
sergefXP_694032.5 None

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