Protein Alignment ca and rcc1

DIOPT Version :9

• Sequence 1: NP_001287593.1
• Gene: ca / 43518
• FlyBaseID: FBgn0000247
• Length: 1961
• Species: Drosophila melanogaster
• Sequence 2: NP_001016101.1
• Gene: rcc1 / 548855
• XenbaseID: XB-GENE-979094
• Length: 420
• Species: Xenopus tropicalis
• Alignment Length: 412
• Identity: 90/412 - (21%)
• Similarity: 150/412 - (36%)
• Gaps: 93/412 - (22%)

  Fly  1195 SLGNNNLCQLGIGRHMQMALQPMLVTALDGMNITMLEAGQYHNAAV-ADGKLYMWGWGIYGQLGQ 1258
            :||..::.|||:|..:....:|.|||..:  :|....||..|...: |.|.:|.:|....|.||:
 Frog    41 TLGQGDVGQLGLGEDVMERKKPALVTLPE--DIVQAAAGGMHTVCLGASGSIYTFGCNDEGALGR 103

  Fly  1259 GSCENIATPQLVSFFKFKKILQISLGHAHTLVLCGAPNSHMEANHCGNELFVFGS--NHFGQLGT 1321
            .:.|..:..|.......:|::|:|.|.:||..|..           ...:|||||  ::.|.:|.
 Frog   104 DTSEEGSETQPGKVDLVEKVVQVSAGDSHTAALTE-----------DGRVFVFGSFRDNNGVIGL 157

  Fly  1322 GNSDHGDTKTNLPVRLEVGDCSLRLIH-TKFFTNLAVDEQDRLFTWGSSPQALRLANQIKRRANA 1385
            ...   ..|:.:||::::....:::.. ......|.||..  |:|.|...|. :|....:|..|.
 Frog   158 LEP---MKKSMVPVQMQINAPVIKIASGNDHLVLLTVDGD--LYTSGCGEQG-QLGRVPERFTNR 216

  Fly  1386 KQKMEENQQRELLSKQLEATLLPAPIPSTSTLVEPTTSYAAVVAGSTPKSSVSD----------- 1439
            ..:           |.||..|:|..| ...........:..|..|:....:||.
 Frog   217 GGR-----------KGLERLLVPQCI-HLKAKGSGRVHFQDVFCGAYFTFAVSQEGHVYGFGLSN 269

  Fly  1440 -----TKDCQDVQNEAAPSDATETIAPASAKAAPPPVPVASPPVLVPEPDPTEHLTPHLVDTSEV 1499
                 ||..|            ...||                         ::||.....|...
 Frog   270 YHQLGTKTTQ------------SCFAP-------------------------QNLTSFKNSTKSW 297

  Fly  1500 AGRILQISSGLFHFCLISSSCTLYTWGKNLEHQLGTEDKDRRAVLKPSPIDSIERPMYVDCGSDF 1564
            .|    .|.|..|...:.|...:|:.|:....:||. .::...:.:|:||..:.:...|.||:..
 Frog   298 VG----FSGGQHHTICVDSEGKVYSLGRAEYGRLGL-GENAEELSEPTPIPILPKTKSVACGASV 357

  Fly  1565 TLVMTTDHVVRAFGGNSNGQCG 1586
            :..::.|..|.|:|..:|.|.|
 Frog   358 SYAVSNDGRVFAWGMGTNLQLG 379

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ca	NP_001287593.1	ATS1	1158..1588	CDD:227511	90/412 (22%)
		RCC1_2	1175..1200	CDD:290274	2/4 (50%)
		RCC1	1193..1240	CDD:278826	14/44 (32%)
		RCC1	1242..1291	CDD:278826	14/48 (29%)
		RCC1_2	1503..1532	CDD:290274	6/28 (21%)
		RCC1	1522..1568	CDD:278826	10/45 (22%)
		RCC1_2	1558..1584	CDD:290274	8/25 (32%)
rcc1	NP_001016101.1	ATS1	21..418	CDD:227511	90/412 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1062377at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010