DRSC/TRiP Functional Genomics Resources

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Protein Alignment ca and HERC5

DIOPT Version :9

Sequence 1:NP_001287593.1 Gene:ca / 43518 FlyBaseID:FBgn0000247 Length:1961 Species:Drosophila melanogaster
Sequence 2:XP_011530324.2 Gene:HERC5 / 51191 HGNCID:24368 Length:1100 Species:Homo sapiens


Alignment Length:822 Identity:173/822 - (21%)
Similarity:295/822 - (35%) Gaps:218/822 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1082 IHMESQRVKYDSIVNALSNFRINYEDNQFAIESSRF-------KPISAGCA-YCACVVD--GTAY 1136
            ||...|..::..|   ||:....:|.:.::::..||       |.|...|. |.:..:.  |..:
Human   250 IHSVDQGAEHMLI---LSSDGKPFEYDNYSMKHLRFESILQEKKIIQITCGDYHSLALSKGGELF 311

  Fly  1137 FWGSS-----GIPSYYSAQKSTEPPEPAHAVKSLDLLSQLNLQVHAIKCGRQHTLILTNNG-LYS 1195
            .||.:     |:...:   .||..|:....:..:.|..        |..|..|::.|:.:| :||
Human   312 AWGQNLHGQLGVGRKF---PSTTTPQIVEHLAGVPLAQ--------ISAGEAHSMALSMSGNIYS 365

  Fly  1196 LGNNNLCQLGIGRHMQMALQPMLVTALDGMNITMLEAGQYHNAAVA-DGKLYMWGWGIYGQLGQG 1259
            .|.|...|||:| |.:....|.|:..||...:..:..|..|:|.:. ||.|:.:|.|.:||||..
Human   366 WGKNECGQLGLG-HTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHN 429

  Fly  1260 SCENIATPQLVSFFKFKKILQISLGHAHTLVLCGAPNSHMEANHCGNELFVFGSNHFGQLGTGNS 1324
            |.:|...|.||:.....::.||:.|..|||..         .:..| ::|.|||...||||.|.:
Human   430 STQNELRPCLVAELVGYRVTQIACGRWHTLAY---------VSDLG-KVFSFGSGKDGQLGNGGT 484

  Fly  1325 DHGDTKTNLPVRLEVGDCSLRL-IHTKFFTNLAVDEQDRLFTWGSSPQALRLANQIKRRANAKQK 1388
              .|....|||::...: .|:| .||        .|::.:...|.:...|....:.....|.|:.
Human   485 --RDQLMPLPVKVSSSE-ELKLESHT--------SEKELIMIAGGNQSILLWIKKENSYVNLKRT 538

  Fly  1389 MEENQQRELLSKQLEATLLPAPIPSTSTLVEPTTSYAAVVAGSTPKSSVS--------DTKDCQD 1445
            :....:..:  |:..|.:......||...::...|..|.:.||..:...:        |....::
Human   539 IPTLNEGTV--KRWIADVETKRWQSTKREIQEIFSSPACLTGSFLRKRRTTEMMPVYLDLNKARN 601

  Fly  1446 VQNEAAPSD-ATETIAPASAKAAPPPVPVASPP-------VLVPEPDPTEHLTPH----LVDTSE 1498
            :..|....| .|..|...........:|..|||       .|:|| .|..|::.:    :|..::
Human   602 IFKELTQKDWITNMITTCLKDNLLKRLPFHSPPQEALEIFFLLPE-CPMMHISNNWESLVVPFAK 665

  Fly  1499 VAGRILQISS-------------------GLFHFCLISSSCTLYTWGKNLEHQLGTE-------- 1536
            |..::...||                   .:|...:|   |.|..|.::.|.....:        
Human   666 VVCKMSDQSSLVLEEYWATLQESTFSKLVQMFKTAVI---CQLDYWDESAEENGNVQALLEMLKK 727

  Fly  1537 ---DKDRRAVLKPSPIDSIERPMYVDCGSDFTLVMTTDHVV----------------RAFGGNSN 1582
               .|..:|.|:.:.|:. ||.........|.|.:..:|::                :....:.:
Human   728 LHRSKKHKAYLRSAAIEE-ERESEFALRPTFDLTVRRNHLIEDVLNQLSQFENEDLRKELWVSFS 791

  Fly  1583 GQCGRDLGPSVERMRQRVVCLPATKRLVRFE---------SQCVEVPVE---------------- 1622
            |:.|.||| .|:  ::...||.|  .:::.|         :.|:..||:                
Human   792 GEIGYDLG-GVK--KEFFYCLFA--EMIQPEYGMFMYPEGASCMWFPVKPKFEKKRYFFFGVLCG 851

  Fly  1623 --------INLPRP----RIRLDQDP-VRYLKVMPP--------------------YQPHFLQPA 1654
                    .|||.|    :..|||.| :..||.:.|                    :..||    
Human   852 LSLFNCNVANLPFPLALFKKLLDQMPSLEDLKELSPDLGKNLQTLLDDEGDNFEEVFYIHF---- 912

  Fly  1655 NISFDQHCSVGTPNYKSSTEHAATGQDSDDMLSSLENLSQNDASFSYNAPVLGDAHSSLDMD--- 1716
            |:.:|::.:...||..|.|.:..   :..|.:|...|...||:..:.........:...|.|   
Human   913 NVHWDRNDTNLIPNGSSITVNQT---NKRDYVSKYINYIFNDSVKAVYEEFRRGFYKMCDEDIIK 974

  Fly  1717 -YTPEEQSYVPLPEQAVGSGMPANAEQLLGRDDDDGSTYTQS 1757
             :.|||...|                 ::|..|.|..|:.::
Human   975 LFHPEELKDV-----------------IVGNTDYDWKTFEKN 999

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
caNP_001287593.1 ATS1 1158..1588 CDD:227511 108/498 (22%)
RCC1_2 1175..1200 CDD:290274 8/25 (32%)
RCC1 1193..1240 CDD:278826 16/46 (35%)
RCC1 1242..1291 CDD:278826 20/48 (42%)
RCC1_2 1503..1532 CDD:290274 8/47 (17%)
RCC1 1522..1568 CDD:278826 11/56 (20%)
RCC1_2 1558..1584 CDD:290274 3/41 (7%)
HERC5XP_011530324.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1062377at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.010

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