Protein Alignment ca and rcc1l

DIOPT Version :9

• Sequence 1: NP_001287593.1
• Gene: ca / 43518
• FlyBaseID: FBgn0000247
• Length: 1961
• Species: Drosophila melanogaster
• Sequence 2: NP_001007510.1
• Gene: rcc1l / 493236
• XenbaseID: XB-GENE-963910
• Length: 449
• Species: Xenopus tropicalis
• Alignment Length: 521
• Identity: 117/521 - (22%)
• Similarity: 170/521 - (32%)
• Gaps: 196/521 - (37%)

  Fly  1098 LSNFRINYEDNQFAIESSRFKPISAGCAYCACVVDG-TA---YFWG-----SSGIPSYYSAQKST 1153
            |:.:|::.::          |..||.|.|...::.. ||   ..||     .|.|..:.|.:..|
 Frog    83 LTPYRLDMDE----------KISSAACGYGFTLLSSKTANITKIWGMGLNKDSQIGFHRSRRDRT 137

  Fly  1154 E------PPEPAHAVKSLDLLSQLNLQVHAIKCGRQHTLILTN-NGLYSLGNNNLCQLG------ 1205
            :      .|.|.    .|.|......:|..:.|||.|:||||: .|::|||||:..|..
 Frog   138 KGYEYILEPSPI----PLPLDKPQETKVLQVSCGRAHSLILTDKEGVFSLGNNSYGQCAREVIEG 198

  Fly  1206 -IGRHMQMALQPMLVTALDGMNITMLEAGQYHNA-AVADGKLYMWGWGIYGQLGQGSCENIATPQ 1268
             |....|:..:   |..||. .:..:..||.|:. ....|::|..|||..||.|
 Frog   199 EIYSESQLIHR---VRELDS-RVVQVACGQDHSLFRTEKGEVYSCGWGADGQTG----------- 248

  Fly  1269 LVSFFKFKKILQISLGHAHTLVLCGAPNSHMEANHCGNELFVFGSNHFGQLGTGNSDHGD-TKTN 1332
                          |||               .|.|.|..         :||      || ...|
 Frog   249 --------------LGH---------------FNVCSNPT---------KLG------GDMAGVN 269

  Fly  1333 LPVRLEVGDCSLRLIHTKFFTNLAVDEQDRLFTWGSSPQALRLANQIKRRANAKQKMEENQQREL 1397
            :......|||.           |||.|:.:|:.||:| :.|:||
 Frog   270 IVQVATYGDCC-----------LAVSEEGQLYGWGNS-EYLQLA--------------------- 301

  Fly  1398 LSKQLEATLLPAPIPSTSTLVEPTTSYAAVVAGSTPKSSVSDTKD--CQDVQNEAAPSDATETIA 1460
                         ..:.||.|.        |....|...|...|.  |......|...|.:..:.
 Frog   302 -------------CVTDSTQVN--------VPQHLPFQHVGKVKHVACGGTGCIAVNGDGSVFVW 345

  Fly  1461 PASAKAAPPPVPVASPPVLVPE---------PDPTEHLTPHLVDTSEVAGRILQISSGLFHFCLI 1516
            ........|....|..|.::|:         ||.                |:.::.|||.||..:
 Frog   346 GYGILGKGPNFLEAQQPEIIPQSLFGLSDFNPDI----------------RVTKVFSGLGHFAAL 394

  Fly  1517 SSSCTLYTWGKNLEHQLGT---EDK--DRRAVLKPSPIDSIERPMYVDCGSDFTLVMTTDHVVRA 1576
            ::...|:.|||||...|||   ||:  ..|..:....:|       |.||.|..:.:     |::
 Frog   395 NNRGELFVWGKNLRGCLGTGRFEDQYFPWRVTVPGEVVD-------VSCGVDHMVAL-----VKS 447

  Fly  1577 F 1577
            |
 Frog   448 F 448

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ca	NP_001287593.1	ATS1	1158..1588	CDD:227511	101/446 (23%)
		RCC1_2	1175..1200	CDD:290274	14/25 (56%)
		RCC1	1193..1240	CDD:278826	14/54 (26%)
		RCC1	1242..1291	CDD:278826	11/48 (23%)
		RCC1_2	1503..1532	CDD:290274	11/28 (39%)
		RCC1	1522..1568	CDD:278826	17/50 (34%)
		RCC1_2	1558..1584	CDD:290274	6/20 (30%)
rcc1l	NP_001007510.1	RCC1	<51..374	CDD:332518	90/417 (22%)
		RCC1_2	381..410	CDD:316098	11/28 (39%)
		RCC1	398..444	CDD:306840	17/52 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1062377at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010