Sequence 1: | NP_001287593.1 | Gene: | ca / 43518 | FlyBaseID: | FBgn0000247 | Length: | 1961 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038956885.1 | Gene: | Sergef / 365243 | RGDID: | 1563497 | Length: | 481 | Species: | Rattus norvegicus |
Alignment Length: | 458 | Identity: | 102/458 - (22%) |
---|---|---|---|
Similarity: | 169/458 - (36%) | Gaps: | 139/458 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 1050 VSHNSDCAMSNDNNPQLFEFCKS-LIETYLAVLIHMESQRVKYDSIV----NALSNFRINYEDNQ 1109
Fly 1110 FAI----ESSRF---KPISAGC--AYCACVVDGTAYF-------------WGSSGIPSYYSAQKS 1152
Fly 1153 TEPPEPAHAVKSLDLLSQLNLQVHAIKCGRQHTLILTN--------NGLYSLGNNNLCQLGIGRH 1209
Fly 1210 MQM---ALQPMLVTALDGMNITMLEAGQYHNAAVAD-GKLYMWGWGIYGQLGQGSCENIAT---- 1266
Fly 1267 PQLVS--FFKFKKILQISLGHAHTLVLCG---APNSHMEANHCGNELFVFGSNHFGQLGTGNSDH 1326
Fly 1327 GDTKTNLPVRLEVGDCSLRLIHTKFFTNLAVDEQDRLFTWGSSPQALRLANQIKRRANAKQKMEE 1391
Fly 1392 NQQRELLSKQLEATLLPAPIPSTSTLVEPTT-------SYAAVVAGSTPKSSVS-DTKDCQDVQN 1448
Fly 1449 EAA 1451 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ca | NP_001287593.1 | ATS1 | 1158..1588 | CDD:227511 | 70/323 (22%) |
RCC1_2 | 1175..1200 | CDD:290274 | 9/32 (28%) | ||
RCC1 | 1193..1240 | CDD:278826 | 15/49 (31%) | ||
RCC1 | 1242..1291 | CDD:278826 | 18/55 (33%) | ||
RCC1_2 | 1503..1532 | CDD:290274 | |||
RCC1 | 1522..1568 | CDD:278826 | |||
RCC1_2 | 1558..1584 | CDD:290274 | |||
Sergef | XP_038956885.1 | ATS1 | 17..>325 | CDD:227511 | 88/377 (23%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166337075 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.840 |