Sequence 1: | NP_001287593.1 | Gene: | ca / 43518 | FlyBaseID: | FBgn0000247 | Length: | 1961 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_608388.2 | Gene: | HERC2 / 33035 | FlyBaseID: | FBgn0031107 | Length: | 4912 | Species: | Drosophila melanogaster |
Alignment Length: | 1580 | Identity: | 291/1580 - (18%) |
---|---|---|---|
Similarity: | 507/1580 - (32%) | Gaps: | 563/1580 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 390 EAATADVPPPPAPPSYSEAVARQSGDQGGVRFQQQQLPAGSMDG--------ILPATRA----RL 442
Fly 443 ASLKSLGSKKLQAIKMRLSDQRQKFDE---FMPDSTMGSFAIMDSPSVTPEPLGTTSGSFYNIQ- 503
Fly 504 ---------NLRSTFLLSALHSN------SHSLTVHSIDISLKPLFVYKIPKHTQEILISSNILY 553
Fly 554 GIHYVDLHCRSDSDHFTAASLLDDPLVANTEKENRDADIEKVDQSDVSAQKSDSTSATTTATSSL 618
Fly 619 DQSDMPSTAINAVSVISSAMASLHTSDEDRFNNLAQLGLFRFENETVLHLYQMAQYRNPSAEPET 683
Fly 684 LTKEEKAKAFELKDIHTPMDYIQFYETADVSSEFSLRQM----EIMQSEFPKINYDPSYVITNKN 744
Fly 745 VYTIQLKKEPFELFLDAALQNEFNQCRDFCNTFDLSFEQCIEFAGDYLLRRKKITQALLTYNKAR 809
Fly 810 VKPIRTALKLAM------YGHTYAL-----MQLSAMALKSTYLLRSRYL-----GHPLLKGILGD 858
Fly 859 ITYRHSEDVRVILPEKHEEEDVNSGVFCSDYHYGVDESISALQMSPSSQFHLANLLLITL----- 918
Fly 919 ---AEKAVNDKNY---------------IPLWNFLVTNS-------KYHTNMTSIVLCQSGLFSS 958
Fly 959 AIILAKIR-GVCLDTFNALISVVAQEFGWYNELNVCLYNLSENIFLETI-TYLPHVSMDYFAF-- 1019
Fly 1020 --IQEKLHHIR----------PCVLQRLSKQLNPFSPALRP---------IVSHNSDCAMSNDNN 1063
Fly 1064 PQLFEFCKSLI-----ETYLAVLIHMESQRVKYDSIVNALSNFRINYEDNQFAIESSRFKPIS-A 1122
Fly 1123 GCAYCACVV--DGTAYFWGSSGIPSYYSAQKSTEPPEPAHAVKSLDLLSQLNLQVHAIKCGRQHT 1185
Fly 1186 LILTNNG-LYSLGNNNLCQLGIGRHMQMALQPMLVTALDGMNITMLEAGQYHNAAV-ADGKLYMW 1248
Fly 1249 GWGIYGQLGQGSCENIATPQLVSFFKFKKILQISLG--HAHTLVLC--GAPNSHMEANHCGNELF 1309
Fly 1310 VFGSNHFGQLGTGNSDHGDTKTNLP-------VRLEVGDCSLRLIHTKFFTNLAVDEQDRLFTWG 1367
Fly 1368 SSPQALRLANQIKRRANAKQKMEENQQRELLSKQLEATLLPAPIPSTSTLVEPTTSYAAVVAGST 1432
Fly 1433 PKSSVSDTKDCQDVQNEAAPSDATETIAPASAKAAPPPVPVASPPVLVPEPDPTEHLTPHLVDTS 1497
Fly 1498 EVAGRILQISSGLFHFCLISSSCTLYTWGKNLEHQLGTEDKDRRAVLKPSPIDSIERPMY--VDC 1560
Fly 1561 GSDFTLV-----MTTDHVVRA---FGGNSNGQCGRDLG----PSVERMRQRVVCLPATKRLVRFE 1613
Fly 1614 SQCVEVPVEINLPRPRIRLDQDPVRYLKVMPPYQPHFLQPANISFDQHCSVGTPNYKSSTEHAAT 1678
Fly 1679 GQDSDDM---------LSSLENLSQ---------NDASFSYNAP----------VLGDAHS---- 1711
Fly 1712 -------------SLDMDYTPEEQSYVPLPEQAVGSGMPANAEQLLGRDDDDGSTYTQSTEGMGE 1763
Fly 1764 SSLQHLRHYIHYCLYAFHGL 1783 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ca | NP_001287593.1 | ATS1 | 1158..1588 | CDD:227511 | 92/452 (20%) |
RCC1_2 | 1175..1200 | CDD:290274 | 9/25 (36%) | ||
RCC1 | 1193..1240 | CDD:278826 | 14/46 (30%) | ||
RCC1 | 1242..1291 | CDD:278826 | 19/50 (38%) | ||
RCC1_2 | 1503..1532 | CDD:290274 | 6/28 (21%) | ||
RCC1 | 1522..1568 | CDD:278826 | 12/52 (23%) | ||
RCC1_2 | 1558..1584 | CDD:290274 | 7/33 (21%) | ||
HERC2 | NP_608388.2 | RCC1 | 638..683 | CDD:278826 | |
RCC1 | 687..737 | CDD:278826 | |||
RCC1 | 740..787 | CDD:278826 | |||
RCC1 | 790..841 | CDD:278826 | |||
RCC1_2 | 828..857 | CDD:290274 | |||
Cyt-b5 | 1290..1363 | CDD:278597 | |||
MIB_HERC2 | 1928..1987 | CDD:284184 | |||
UBA_HERC2 | 2515..2559 | CDD:270585 | 6/47 (13%) | ||
Cul7 | 2624..2699 | CDD:288381 | 12/113 (11%) | ||
APC10-HERC2 | 2762..2932 | CDD:176485 | 39/216 (18%) | ||
RCC1 | 3037..3088 | CDD:278826 | 14/55 (25%) | ||
RCC1 | 3091..3140 | CDD:278826 | 15/49 (31%) | ||
RCC1 | 3144..3194 | CDD:278826 | 19/49 (39%) | ||
RCC1 | 3197..3246 | CDD:278826 | 17/71 (24%) | ||
RCC1 | 3250..3298 | CDD:278826 | 12/154 (8%) | ||
RCC1 | 3302..3350 | CDD:278826 | 12/49 (24%) | ||
RCC1_2 | 4136..4166 | CDD:290274 | |||
RCC1 | 4154..4203 | CDD:278826 | |||
RCC1 | 4206..4257 | CDD:278826 | |||
RCC1 | 4260..4309 | CDD:278826 | |||
RCC1 | 4312..4360 | CDD:278826 | |||
RCC1 | 4364..4413 | CDD:278826 | |||
HECTc | 4509..4880 | CDD:238033 | |||
HECTc | 4553..4878 | CDD:214523 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR22870 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.920 |