Sequence 1: | NP_001287593.1 | Gene: | ca / 43518 | FlyBaseID: | FBgn0000247 | Length: | 1961 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001012074.1 | Gene: | Herc4 / 309758 | RGDID: | 1310971 | Length: | 1057 | Species: | Rattus norvegicus |
Alignment Length: | 423 | Identity: | 90/423 - (21%) |
---|---|---|---|
Similarity: | 148/423 - (34%) | Gaps: | 182/423 - (43%) |
- Green bases have known domain annotations that are detailed below.
Fly 1171 LNLQVHAIKCGRQHTLILTNNG-LYSLGNNNLCQLGIGRHMQMALQPMLVTALDGMNITMLEAGQ 1234
Fly 1235 YHNAAVAD-GKLYMWGWGIYGQLG-QGSCENIATPQLVSFFKFKKILQISLGHAHTLVLCGAPNS 1297
Fly 1298 HMEANHCGNELFVFGSNHFGQLGTGNSDHGDTKTNLPVRLEVGDCSLRLIHTKFFTNLAVDEQDR 1362
Fly 1363 LFTWGSSPQALRLANQIKRRANAKQKMEENQQRELLSKQLEATLLPAPIPSTSTLVEPTTSYAAV 1427
Fly 1428 VAGSTPKSSVSDTKDCQDVQNEAAPSDATETIAPASAKAAPPPVPVASPPVLVPEPDPTEHLTPH 1492
Fly 1493 LVDTSEVAGRILQISSGLFHFCLISSSCTLYTWGKNLEHQLGTEDKDRRAVLKPSPIDSI--ERP 1555
Fly 1556 MYVDCGSDFTLVMTTDHVVRAFGGNSNGQCGRD 1588 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ca | NP_001287593.1 | ATS1 | 1158..1588 | CDD:227511 | 90/421 (21%) |
RCC1_2 | 1175..1200 | CDD:290274 | 8/25 (32%) | ||
RCC1 | 1193..1240 | CDD:278826 | 17/46 (37%) | ||
RCC1 | 1242..1291 | CDD:278826 | 20/50 (40%) | ||
RCC1_2 | 1503..1532 | CDD:290274 | 7/28 (25%) | ||
RCC1 | 1522..1568 | CDD:278826 | 16/47 (34%) | ||
RCC1_2 | 1558..1584 | CDD:290274 | 8/25 (32%) | ||
Herc4 | NP_001012074.1 | RCC1 1 | 1..51 | 6/18 (33%) | |
RCC1 | 3..49 | CDD:278826 | 6/16 (38%) | ||
RCC1 2 | 52..101 | 19/51 (37%) | |||
RCC1 | 52..99 | CDD:278826 | 18/49 (37%) | ||
RCC1 3 | 102..154 | 20/51 (39%) | |||
RCC1 | 102..152 | CDD:278826 | 19/49 (39%) | ||
RCC1 4 | 156..207 | 19/211 (9%) | |||
RCC1 | 157..205 | CDD:278826 | 19/208 (9%) | ||
RCC1 5 | 208..259 | 17/52 (33%) | |||
RCC1 | 208..257 | CDD:278826 | 17/50 (34%) | ||
RCC1 | 260..308 | CDD:278826 | 6/18 (33%) | ||
RCC1 6 | 261..311 | 6/17 (35%) | |||
RCC1 7 | 313..366 | ||||
RCC1 | 313..>343 | CDD:278826 | |||
HECTc | 709..1055 | CDD:238033 | |||
HECTc | 735..1054 | CDD:214523 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.010 |