Sequence 1: | NP_001287593.1 | Gene: | ca / 43518 | FlyBaseID: | FBgn0000247 | Length: | 1961 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006229362.1 | Gene: | Herc2 / 308669 | RGDID: | 1307989 | Length: | 4836 | Species: | Rattus norvegicus |
Alignment Length: | 1483 | Identity: | 272/1483 - (18%) |
---|---|---|---|
Similarity: | 449/1483 - (30%) | Gaps: | 571/1483 - (38%) |
- Green bases have known domain annotations that are detailed below.
Fly 236 NSGQNRAIIGYSDGSICFVGLSPNCPMIASTAIENGSVMRLVICKDKAYDGVMLLITSSLKQQYK 300
Fly 301 LLLEQKAIKYVYPGDSSPTTREGAWQIVMSVQDKHQSAATGARQSNSSDPASDSS------QLEE 359
Fly 360 DVFAPPSSDDVVCSGPGAANSDPSTVSASAEAATADVPPPPAPPSYSEAVARQSGDQGGVRFQQQ 424
Fly 425 QLPAGSMDGILPATRARLASLKSLGSKKLQAIKMRLSDQRQKFDEF----MPDSTMGSFAIMDSP 485
Fly 486 SVTPEPLGTTSGSFYNIQNLRSTFLLSALHSNSHSLTVHSIDISLKPLFVYKIPKHTQEILISSN 550
Fly 551 ILYGIHYVDLHCRSDSDHFTAASLLDDPLVANTEKENRDADIEKVDQSDVSAQKS----DSTSAT 611
Fly 612 TTA--------------TSSLDQSDMPSTAINAVSVISSAMASLHTSDEDRFNNLAQLGLFRFEN 662
Fly 663 ETVLHLYQMAQYRNPSAEPETLTKEEKAKAFELKDIHTPMDYIQFYETADVSS-----EFSLRQM 722
Fly 723 EIMQSEFPKINYDPSYVITNKNVYTIQLKKEPFELFLDAALQNEFNQCRDFCNTFDLSFEQCIEF 787
Fly 788 AGDYLLRRKKITQALLTYNKARVKPIRTALKLAMYGHTYALMQLSAMAL--KSTYLLRSRYLGHP 850
Fly 851 LLKGILGDITYRHSEDVRV--ILPEKHEEEDVNSGVFCSDYHYGVDESISALQMSPSSQFHLANL 913
Fly 914 LLITLAEKAVNDKNYIPLWNFLVTNSKYHTNMTSIVLCQSGLFSSAIILAKIRGVC---LDTFNA 975
Fly 976 LISVVAQEFGWYNELNVCLYNLSEN--IFLETITYLPHVSMDYFAFIQEKLHHIRPCVLQRLSKQ 1038
Fly 1039 LNPFSPALRPIVSHNSDCAMSNDNNPQLFEFCKSLIE-----------------TYLAVLIHMES 1086
Fly 1087 QRVKYDSIVNALSNFR----INYEDNQFAIESSRFKPISAGCAYCACVVDGTAYF--WGSSGIPS 1145
Fly 1146 YYSAQKSTEPPEPAHAVKSLDLLSQLNLQVHAIKCGRQHTLILTNNG-LYSLGNNNLCQLGIGRH 1209
Fly 1210 MQMALQPMLVTALDGMNITMLEAGQYHNAAV-ADGKLYMWGWGIYGQLGQGSCENIATPQLVSFF 1273
Fly 1274 KFKKILQISLGHAHTLVLCGAPNSHMEANHCGNELFVFGSNHFGQLGTGNSDHG-------DTKT 1331
Fly 1332 NL-PVRLEVGDCSLRLIHTKFFTNLAVDEQDRLFTWGSSPQALRLANQIKRRANAKQKMEENQQR 1395
Fly 1396 ELLSKQLEATLLPAPIPSTSTLVEPTTSYAAVVAGSTPKSSVSDTKDCQDVQNEAAPSDATETIA 1460
Fly 1461 PASAKAAPPPVPVASPPVLVPEPDPTEHLTPHLVDTSEVAGRILQISSGLFHFCLISSSCTLYTW 1525
Fly 1526 GKNLEHQLGTEDKDRRAVLKPSPIDSIE--RPMYVDCGSDFTLVMTTDHVVRAFGGNSNGQCGRD 1588
Fly 1589 LGPSVERMRQRVVCLPATKRLVRFESQCVEVPVEINLPRPRIRLDQDPVRYLK 1641 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ca | NP_001287593.1 | ATS1 | 1158..1588 | CDD:227511 | 89/441 (20%) |
RCC1_2 | 1175..1200 | CDD:290274 | 9/25 (36%) | ||
RCC1 | 1193..1240 | CDD:278826 | 13/46 (28%) | ||
RCC1 | 1242..1291 | CDD:278826 | 16/48 (33%) | ||
RCC1_2 | 1503..1532 | CDD:290274 | 9/28 (32%) | ||
RCC1 | 1522..1568 | CDD:278826 | 18/47 (38%) | ||
RCC1_2 | 1558..1584 | CDD:290274 | 8/25 (32%) | ||
Herc2 | XP_006229362.1 | ATS1 | <494..787 | CDD:227511 | |
Cyt-b5 | 1212..1283 | CDD:395121 | |||
MIB_HERC2 | 1871..1931 | CDD:399589 | |||
UBA_HERC2 | 2461..2508 | CDD:270585 | |||
Cul7 | 2555..2632 | CDD:402903 | |||
SH3_15 | 2640..2697 | CDD:408152 | |||
ZZ_HERC2 | 2707..2751 | CDD:239084 | |||
APC10-HERC2 | 2766..2911 | CDD:176485 | |||
ATS1 | 2957..3323 | CDD:227511 | |||
ATS1 | 4025..4330 | CDD:227511 | 90/465 (19%) | ||
HECTc | 4423..4794 | CDD:238033 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5184 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |