Protein Alignment ca and Rcbtb2

DIOPT Version :10

• Sequence 1: NP_733309.3
• Gene: ca / 43518
• FlyBaseID: FBgn0000247
• Length: 1961
• Species: Drosophila melanogaster
• Sequence 2: NP_954515.1
• Gene: Rcbtb2 / 290363
• RGDID: 735048
• Length: 551
• Species: Rattus norvegicus
• Alignment Length: 277
• Identity: 76/277 - (27%)
• Similarity: 124/277 - (44%)
• Gaps: 39/277 - (14%)

  Fly  1107 DNQFAIESSRFKPIS----AGCAY------CACVVDGTAYFWGSSGIPSYYSAQKSTEPPEPAHA 1161
            |.|..||..|...::    |..:|      .....||..:.||.:.. |......:.....|.|.
  Rat    82 DIQSTIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVFTWGHNAY-SQLGNGTTNHGLVPCHI 145

  Fly  1162 VKSLDLLSQLNLQVHAIKCGRQHTLILTNNG-LYSLGNNNLCQLGIGRHMQMALQPMLVTALDGM 1225
            ..:|.     |.||..:.||..|:|:||::| :::.|.||..|:|.|......:...:...|...
  Rat   146 STNLS-----NKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNK 205

  Fly  1226 NITMLEAGQYHNAAVAD-GKLYMWGWGIYGQLGQGSCENIATPQLVSFFKFKKILQISLGHAHTL 1289
            .:..:..||..:.||.| |::|:||:...||||.||..|..||..|:..:..::.:::.|:||||
  Rat   206 VVMSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTL 270

  Fly  1290 VLCGAPNSHMEANHCGNELFVFGSNHFGQLGTGNSDHGDTKTNLPVR----LEVGDCSLRLIHTK 1350
            ||...           .:::.:|:|.:|||||||..:....|.:.|.    :|:..|     |:.
  Rat   271 VLTDE-----------GQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAAC-----HSA 319

  Fly  1351 FFTNLAVDEQDRLFTWG 1367
             .|:.|..:...::.||
  Rat   320 -HTSAAKSQGGHVYMWG 335

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ca	NP_733309.3	ATS1	1181..1587	CDD:444065	57/193 (30%)
Rcbtb2	NP_954515.1	RCC1 1. /evidence=ECO:0000255	64..115		7/32 (22%)
		ATS1	<71..335	CDD:444065	74/275 (27%)
		RCC1 2. /evidence=ECO:0000255	117..169		16/57 (28%)
		RCC1 3. /evidence=ECO:0000255	171..222		12/50 (24%)
		RCC1 4. /evidence=ECO:0000255	223..274		21/50 (42%)
		RCC1 5. /evidence=ECO:0000255	276..326		16/55 (29%)
		RCC1 6. /evidence=ECO:0000255	328..382		2/8 (25%)
		BTB_POZ_RCBTB2_CHC1L	374..490	CDD:349663
		BACK_RCBTB2	487..551	CDD:350604