DRSC/TRiP Functional Genomics Resources

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Protein Alignment ca and CG33288

DIOPT Version :9

Sequence 1:NP_001287593.1 Gene:ca / 43518 FlyBaseID:FBgn0000247 Length:1961 Species:Drosophila melanogaster
Sequence 2:NP_996136.2 Gene:CG33288 / 2768968 FlyBaseID:FBgn0053288 Length:1115 Species:Drosophila melanogaster


Alignment Length:862 Identity:167/862 - (19%)
Similarity:288/862 - (33%) Gaps:278/862 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1045 ALRPIVSHNSDCAMSN------DNNPQLFEFCKSLIETYLAVLIHMESQRVKYDSIVNALSNFRI 1103
            ||:.:.....|.|..|      .::.::|...:::......|..|..|.:|...........||:
  Fly    94 ALKTLGLKICDVAFGNHWAVMLTHSNEIFFTGRNIFPEDTHVAQHFTSAQVDQQPCAIIRKPFRL 158

  Fly  1104 NYEDNQFA--IESSRFKPISAGCAYCACVVDGTAYFWGSSGIPSYYSAQ---KSTEPPEPAHAVK 1163
            ...|:..:  .|:..|..:.||..:.| |:..|....|...     :||   ...|.....|.|:
  Fly   159 EEFDDYLSKNEETDNFMTVQAGKEHFA-VLTTTGRLIGCGS-----NAQLQLGELEADYDGHPVE 217

  Fly  1164 SLDLLSQLNLQVHAIKCGRQHTLILTNNG-LYSLGNNNLCQLGIGRHMQMALQPMLVTALDGMNI 1227
                 .:|:..|....||.:.||:||..| |:..|:.|.........:|..|.|  ..|:..|:|
  Fly   218 -----IRLDAPVQQFTCGPESTLVLTATGNLFLTGHLNEFVFPRFTELQKNLPP--TEAIIFMHI 275

  Fly  1228 T-------MLEAGQYH-------NAAVADGKLY---------MW----GWGIYGQLGQG------ 1259
            :       :..||..:       |.::...:.|         :|    |:..|..|.:.      
  Fly   276 SKTSEVYIVTNAGSIYRSFESLRNKSLVFQRFYDYDCEENGPIWKLLKGFSFYAVLSKANKFFTT 340

  Fly  1260 ---SCENIATPQLVSFFKFKKILQISLGHAHTLVLCGAPNSHM---------EANHCGNELFVFG 1312
               |..::.|.:.:|.||..::|.|::|..|.||. |.|.|.|         |.|...|..||. 
  Fly   341 FSESGHHLKTFREISKFKNLRLLDIAVGDQHVLVQ-GIPRSSMSSASVNGSAEPNRYVNRSFVL- 403

  Fly  1313 SNHFGQLGTGNSDHGDTKT----------------NLPVRLEVGDCSLRLIHTKFFTNLAVDEQD 1361
                 |....|.:..||:|                :|.:...||:.:..   ....|..|::...
  Fly   404 -----QPTDANGNKEDTRTHSGRSLIKQEGMEETEDLSMSTTVGELAAA---AGAGTAAAMEAVK 460

  Fly  1362 RLFTWGSSPQ--------------------------ALRLANQIKRRANAKQKMEENQ------- 1393
            .|.. |..|:                          ..:.:::|...:|..:|.|:||       
  Fly   461 HLIN-GEKPEEKSDLTRYQDLNANIESADIIPKEHKEAKGSDEIGPNSNISEKEEDNQIADRVTP 524

  Fly  1394 --QRELLSKQLEATLLPAPIPSTSTLVEPTTSYAAVVAGSTPKSSV--SDTKD------CQDVQN 1448
              :.|..:.| |.::......:||..::....|..:...:|.:|.|  :|||:      ...|:.
  Fly   525 GNKNESAADQ-EKSVHSPNTAATSEAIKTNDGYKEMKPSATIESPVITADTKESSLKPIVSPVKT 588

  Fly  1449 EAAPSDATETIAPASAKAAPPPV-PVAS------PPVLVPEP--DPTEHLTPH-------LVDTS 1497
            :.:|:...|    :|.|::..|| |..|      ||...|.|  .|||.|..:       |||..
  Fly   589 KRSPAKTIE----SSIKSSSSPVKPTESMQKLPTPPTHTPTPPNSPTESLRSNKSAHDMELVDPK 649

  Fly  1498 -EVAGRILQISSGLFHFCLISSSCTLYTWGKNLEHQLGTEDKDRRAVLKPSPIDSIERPMYVDCG 1561
             :|.|....:......:...|:|.|..|                   :|.:||.:.         
  Fly   650 PKVPGSQETLLRPRTPYPESSNSSTPQT-------------------IKKTPIRNF--------- 686

  Fly  1562 SDFTLVMTTDHVVRAFGGNSNGQCGRDLGPSVERMRQRVVCLPATKRLVRFESQCVEVPVEINLP 1626
             .:...|..||:.|.         ..:|..|::.:.:    :|..|             :.:|.|
  Fly   687 -SYESAMDHDHLERT---------SPELVSSLDTVEE----VPTAK-------------IHVNTP 724

  Fly  1627 RPRIRLDQDPVRYLKVMPPYQPHFLQPANISFDQHCSVGTPNYKSSTEHAATGQDSDDMLSSLEN 1691
                            .||.:.          |:|.:|.....|.||       ||..:::.:..
  Fly   725 ----------------TPPTED----------DEHLAVEITTTKDST-------DSSKVINEIRF 756

  Fly  1692 LSQNDASFSYNAPVLGDAHSSLDMDYTPEEQSYVPLPEQAVGSG---MPANAEQLLGRDDDDGST 1753
            :  ||               .:|:....|||    :|:..:.|.   :.::.||.:.|.::....
  Fly   757 I--ND---------------GVDVTSRVEEQ----MPDTPLESSVEDLESDGEQKMQRGEEQVDK 800

  Fly  1754 YTQSTE----GMGESSL 1766
            ...|:|    .:||.::
  Fly   801 IVTSSEEAVSKVGEDAI 817

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
caNP_001287593.1 ATS1 1158..1588 CDD:227511 112/551 (20%)
RCC1_2 1175..1200 CDD:290274 10/25 (40%)
RCC1 1193..1240 CDD:278826 12/60 (20%)
RCC1 1242..1291 CDD:278826 15/70 (21%)
RCC1_2 1503..1532 CDD:290274 4/28 (14%)
RCC1 1522..1568 CDD:278826 4/45 (9%)
RCC1_2 1558..1584 CDD:290274 4/25 (16%)
CG33288NP_996136.2 ATS1 5..>260 CDD:227511 38/176 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442618
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5184
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.830

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