Protein Alignment ca and Rccd1

DIOPT Version :10

• Sequence 1: NP_733309.3
• Gene: ca / 43518
• FlyBaseID: FBgn0000247
• Length: 1961
• Species: Drosophila melanogaster
• Sequence 2: NP_775621.2
• Gene: Rccd1 / 269955
• MGIID: 2444156
• Length: 377
• Species: Mus musculus
• Alignment Length: 312
• Identity: 73/312 - (23%)
• Similarity: 112/312 - (35%)
• Gaps: 101/312 - (32%)

  Fly  1120 ISAGCAYCACV---------------VDGTAYFW-------------GSS-------------GI 1143
            :|||.:|.|.|               .||....|             |||             |.
Mouse    45 VSAGWSYTALVTRGGRVELSGSVSGAADGCRDVWASEELLVLLRNKGGSSTEVQAWVPGSALQGE 109

  Fly  1144 P----SYYSAQKSTEPPEPAHAVK--SLDLLS----------------QLNLQVHAIKCGRQHTL 1186
            |    :..|..|.....||:...:  :|.||.                ...|:|..::.|.:|.|
Mouse   110 PLWVQNLVSGAKGQGEDEPSRESRMGTLPLLPCARAYVTPEPPFCQPLAPELRVRQLELGAEHVL 174

  Fly  1187 ILTNNG-LYSLGNNNLCQLGIGRHMQMALQPMLVTALDGMNITMLEAGQYHNAAVAD-GKLYMWG 1249
            :|...| ::|.|.....|||.|. ::..|:|.|:.||.|:.:..:.||.:|:..::: |.:|:||
Mouse   175 LLCAAGQVFSWGAGRHGQLGHGT-LEAELEPRLLEALQGLRMAKVAAGGWHSVCLSETGDIYIWG 238

  Fly  1250 WGIYGQLG---------------------QGSCENIAT------PQLVSFFKFKKILQISLGHAH 1287
            |...|||.                     .|..|.:|.      ...::...|..:|.:.||...
Mouse   239 WNESGQLALPTRSGTENKAEREEATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSDA 303

  Fly  1288 TLVLCGAPNSHMEANHCGNELFVFGSNHFGQLGTGNSDHGD-TKTNLPVRLE 1338
            .:..||  :.|........||:.:|...:||||     |.| |..:.|..:|
Mouse   304 VMASCG--SRHTAVVTRTGELYTWGWGKYGQLG-----HKDSTSLDRPCCVE 348

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ca	NP_733309.3	ATS1	1181..1587	CDD:444065	50/188 (27%)
Rccd1	NP_775621.2	Interaction with KDM8. /evidence=ECO:0000250|UniProtKB:A6NED2	1..172		24/126 (19%)
		ATS1	<163..344	CDD:444065	49/188 (26%)
		RCC1 2	179..230		16/51 (31%)
		RCC1 3	232..289		11/56 (20%)
		RCC1 4	319..372		12/35 (34%)