DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ca and Eea1

DIOPT Version :9

Sequence 1:NP_001287593.1 Gene:ca / 43518 FlyBaseID:FBgn0000247 Length:1961 Species:Drosophila melanogaster
Sequence 2:XP_006513585.1 Gene:Eea1 / 216238 MGIID:2442192 Length:1458 Species:Mus musculus


Alignment Length:830 Identity:158/830 - (19%)
Similarity:264/830 - (31%) Gaps:272/830 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 HECPNSKKCPNHSTGLEESTAEPM-----------------DQLAENLEQARLQEGEEEEPLGHD 179
            |:...||:.......|::|....:                 ||..:||| |.||:|:|...|...
Mouse   528 HQLEKSKQQHQEQQALQQSATAKLREAQNDLEQVLRQIGDKDQKIQNLE-ALLQKGKESVSLLEK 591

  Fly   180 LPEHMLVRNSGTEDAVQPLPQ--------QQQTIDTTGNSQVMAASF-MASKTCPYPLSVVWWKT 235
            ..|.:..:....|.....|.|        |||....|...:..:.|. .|.:.....:.......
Mouse   592 EREDLYAKIQAGEGETAVLNQLQEKNHALQQQLTQLTEKLKNQSESHKQAEENLHDQVQEQKAHL 656

  Fly   236 NSGQNRAIIGYSDGSICFVGLSPNCPMIASTAIENGSVMRLVICKDKAYDGVMLLITSSLKQQYK 300
            .:.|:|.:           .|..:...::|...|:         |:|...     :...:|.:.:
Mouse   657 RAAQDRVL-----------SLETSVSELSSQLNES---------KEKVSQ-----LDIQIKAKTE 696

  Fly   301 LLLEQKAIKYVYPGD--SSPTTREGAWQIVMSVQDKHQ------------SAATGARQ------- 344
            |||..:|.|.....|  :...|.:.|      :|||.|            :|....:|       
Mouse   697 LLLSAEAAKAAQRADLQNHLDTAQHA------LQDKQQELNKVSVQLDQLTAKFQEKQEHCIQLE 755

  Fly   345 SNSSDPASDSSQLEEDVFAPPSSDDVVCSGPG---AANSDPSTVSASAEAATADVPPPPAPPSYS 406
            |:..|.......||:.|      :|:    .|   ...:|...|.||.|.|...:.         
Mouse   756 SHLKDHKEKHLSLEQKV------EDL----EGHIKKLEADALEVKASKEQALQSLQ--------- 801

  Fly   407 EAVARQSGDQGGVRFQQQQLPAG-------------SMDGILPATRARLASLKSLGSKKLQAIKM 458
                           ||:||...             ..:.::..|:..|.:    .|:.|:.||.
Mouse   802 ---------------QQRQLSTDLELRNAELSRELQEQEEVVSCTKLDLQN----KSEILENIKQ 847

  Fly   459 RLSDQ-------RQKFDEFMPDS-----TMG----------------SFAIMDSPSVTPEPLGTT 495
            .|:.:       :|:|::...||     .:|                ..|::...|.|.|.|...
Mouse   848 TLTKKEEENVVLKQEFEKLSQDSKTQHKELGDRMQAAVTELTAVKAQKDALLAELSTTKEKLSKV 912

  Fly   496 SGSFYNIQNLRSTF-------------LLSALHSNSHSLTVHSIDISLK-----PLFVYKIPKHT 542
            |.|   ::|.:|.|             |..|.....|.|.|.: :.:||     ...:.|..:.:
Mouse   913 SDS---LKNSKSEFEKENQKGKAAVLDLEKACKELKHQLQVQA-ESALKEQEDLKKSLEKEKETS 973

  Fly   543 QEILISSNILYGIHYVDLHCRSDSDHFTAASLLDDPLVANT------EKENRDADIE-------- 593
            |::.|..|.:.|.       .|.:.:.......|:..:..|      ..|.:...||        
Mouse   974 QQLKIELNSVKGE-------VSQAQNTLKQKEKDEQQLQGTINQLKQSAEQKKKQIEALQGEVKN 1031

  Fly   594 KVDQSDV--------SAQKSDSTSATTTATSSLD-------------QSDM---PSTAINAVSVI 634
            .|.|..|        |:|.:...:|.....|:|.             |||:   .|..:.....:
Mouse  1032 AVSQKTVLENKLQQQSSQAAQELAAEKGKLSALQSNYEKCQADLKQLQSDLYGKESELLATRQDL 1096

  Fly   635 SSAMASLHTSDEDRFNNLAQLGLFRFENETVLHLY-QMAQYRNPSAEPETLTKEEKAKAFELKDI 698
            .|....|..:.||..:|..|:|   .:|:::..|. ..|.....||:.|.|.||: :||.|    
Mouse  1097 KSVEEKLTLAQEDLISNRNQIG---NQNKSIQELQAAKASLEQDSAKKEALLKEQ-SKALE---- 1153

  Fly   699 HTPMDYIQFYETADVSSEFSLRQMEIMQ-----SEFPKINYDPSYVITNKNVYTIQLKKEPFELF 758
                         |...|.|:::.|::.     :|..:|.......||..|.   :||...    
Mouse  1154 -------------DAQREKSVKEKELVAEKSKLAEMEEIKCRQEKEITKLNE---ELKSHK---- 1198

  Fly   759 LDAALQNEFNQCRDFCNTFDLSFEQCIEFAG--DYL---LRRKKITQALL 803
                 |....:..:..:...|..:|.:|..|  |.|   |.::|.:|.|:
Mouse  1199 -----QESIKEITNLKDAKQLLIQQKLELQGRVDSLKAALEQEKESQQLM 1243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
caNP_001287593.1 ATS1 1158..1588 CDD:227511
RCC1_2 1175..1200 CDD:290274
RCC1 1193..1240 CDD:278826
RCC1 1242..1291 CDD:278826
RCC1_2 1503..1532 CDD:290274
RCC1 1522..1568 CDD:278826
RCC1_2 1558..1584 CDD:290274
Eea1XP_006513585.1 SMC_prok_B <130..794 CDD:274008 59/307 (19%)
Smc 504..1346 CDD:224117 158/830 (19%)
FYVE_EEA1 1394..1456 CDD:277269
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5184
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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