Sequence 1: | NP_001287593.1 | Gene: | ca / 43518 | FlyBaseID: | FBgn0000247 | Length: | 1961 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012813154.2 | Gene: | herc2 / 100487407 | XenbaseID: | XB-GENE-1012659 | Length: | 4848 | Species: | Xenopus tropicalis |
Alignment Length: | 2179 | Identity: | 408/2179 - (18%) |
---|---|---|---|
Similarity: | 708/2179 - (32%) | Gaps: | 726/2179 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 GMFELRPLITNISCKLSAVTAGLDEKRQFLCLVSEENEILLRYISAASGQEVV--KMISW----F 69
Fly 70 RNRVIH-DVCFDPAGVWLLVL-CFDNTLHIVPALALVDKA-------------HGLSACSLYSTT 119
Fly 120 ---QVTSYIIPFVGPHECPNSKKCPN------HSTGLEESTAE--PMDQLAENLEQARLQE---- 169
Fly 170 ---------GEEEEP---LGH---DLPEHMLVR--------NS---GTE-----------DAVQP 197
Fly 198 LPQQQQTIDTTGNSQV--------------------------MAASFMASKT----CPYPLSVV- 231
Fly 232 ---WWKTNSGQNRAIIGYSDGSICFVGLSPN---CPMIASTAIENGSVMRLVICKDKAYDGVMLL 290
Fly 291 ITSSLKQQYKLLLEQKAIKYVYPGDSSPTTREGAWQIVMSVQDKHQSAATGARQSNSSDPASDSS 355
Fly 356 QLEEDVFAPPSSDDVVCSGPGAANSDPSTVSASAEAATADVPPPPAPPSYSEAVARQSGDQGGVR 420
Fly 421 FQQQQLPAGSMDGILPATRAR--LASLKSLGSKKL------QAIKMRLSD-----QRQKFD---- 468
Fly 469 -EFMPDS----------------------TMGSFAIMDS------PSVTPEPLGTTSGSFYNIQN 504
Fly 505 LRSTFLLSALHS------NSHSL----TVHSIDISLKPLFVYKIPKHTQEILISSNILYGIHYVD 559
Fly 560 LHCR--------------SDSDHFTAASLLDDPLVAN----TEKENRDADIEKVDQSDVSAQ--- 603
Fly 604 ---KSDSTSAT--TTATSSLDQSDMPSTAINAVSVISSAMASLHTSDEDRFNNLAQLGLFRFENE 663
Fly 664 -----TVLHL--YQMAQYRNPSAEPETLTKEEKAKAFELKDIH---------------TP----- 701
Fly 702 ----MDY--IQFYETADV------SSEFSLRQMEIMQSEFPKINYDPSYVITNKNVYTIQ---LK 751
Fly 752 KEPFELFLDAALQ-NEFNQCRDFCNTFDLSFE-------------------QC--IEFAGDYLLR 794
Fly 795 RKKITQALLTY------------NKARVKPIRTALKLAMYGHTYALMQLSAMALKSTYLLRSRYL 847
Fly 848 GHPLLKGILGDITYR----------HSEDVRVILPEK-------HEEE---DVNSGVFCSDYHYG 892
Fly 893 VDESISALQMSP--SSQFHLANLLLITLAEKAVNDKNYIPLWNFLVT---NSKYHTNMT------ 946
Fly 947 ---SIVLC----------QSGLFSSAIILAKIRGVCLDTFNALISVVAQEFGWYNELNVC--LYN 996
Fly 997 LSENIFLETITYLPH-VSMDYFAFIQEKLHHIRPCVLQRLSKQLNP----FSPALRPIVSHNSDC 1056
Fly 1057 AMSN------------DNNPQLFEFCKSLIETYLAVLIHMESQRVKYDSI------VNALSNFRI 1103
Fly 1104 ---------------NYEDNQFAIESSRFKPISAGCAYCACVVDGTAYFWGSSGIPSYYSAQKST 1153
Fly 1154 EPPEPAHAVKSLDLLSQLNLQVHAIKCGRQHTLILTNNG-LYSLGNNNLCQLGIGRHMQMALQPM 1217
Fly 1218 LVTALDG---MNITMLEAGQYHNAAVADGKLYMWGWGIYGQLGQGSCENIATPQLVSFFKFKKIL 1279
Fly 1280 QISLGHAHTLVLCGAPNSHMEANHCGNELFVFGSNHFGQLGTGNSDHGDTKTNLP---VRLEVGD 1341
Fly 1342 ------CSLRLIHTKFFTNLAVDEQDRLFTWGSSPQALRLANQIKRRANAKQKMEENQQRELLSK 1400
Fly 1401 QLEATLLPAPIPSTSTLVEPTTSYAAVVAGSTPKSSVSDTKDCQDVQNEAAPSDATETIAPASAK 1465
Fly 1466 AAPPPVPVASPPVLVPEPDPTEHLTPHLVDTSEVAGRILQISSGLFHFCLISSSCTLYTWGKNLE 1530
Fly 1531 HQL--GTEDKDRRAVLKPSPIDSIE--RPMYVDCGSDFTLVMTTDHVVR-------AFGGNSNGQ 1584
Fly 1585 CGRD-LGPSVERMRQRVVCLPATKRLVRFESQCVEVPVEINLPRPRIRLD-----QDPVRYLKVM 1643
Fly 1644 PPYQPHF--------LQPANISFDQHC---SVGTPNYKSSTEHAATGQD---SDDMLSSLENLSQ 1694
Fly 1695 NDASFSYNAPVLGDAHSSLDMDYTPEEQSYVPLPEQAVGSGMPANAEQLLGRDDDDGS------T 1753
Fly 1754 YTQSTEGMGESSLQHLRHYIHYCLYAFHGLYNPD 1787 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ca | NP_001287593.1 | ATS1 | 1158..1588 | CDD:227511 | 101/453 (22%) |
RCC1_2 | 1175..1200 | CDD:290274 | 6/25 (24%) | ||
RCC1 | 1193..1240 | CDD:278826 | 11/49 (22%) | ||
RCC1 | 1242..1291 | CDD:278826 | 19/48 (40%) | ||
RCC1_2 | 1503..1532 | CDD:290274 | 7/28 (25%) | ||
RCC1 | 1522..1568 | CDD:278826 | 15/49 (31%) | ||
RCC1_2 | 1558..1584 | CDD:290274 | 8/32 (25%) | ||
herc2 | XP_012813154.2 | ATS1 | <501..794 | CDD:227511 | |
Cyt-b5 | 1219..1291 | CDD:395121 | |||
MIB_HERC2 | 1879..1939 | CDD:399589 | 11/59 (19%) | ||
UBA_HERC2 | 2471..2518 | CDD:270585 | 5/46 (11%) | ||
Cul7 | 2566..2643 | CDD:402903 | 15/81 (19%) | ||
SH3_15 | 2651..2708 | CDD:408152 | 13/91 (14%) | ||
ZZ_HERC2 | 2718..2762 | CDD:239084 | 13/70 (19%) | ||
APC10-HERC2 | 2777..2922 | CDD:176485 | 27/176 (15%) | ||
ATS1 | 2968..3334 | CDD:227511 | 99/452 (22%) | ||
ATS1 | 4037..4342 | CDD:227511 | |||
HECTc | 4435..4806 | CDD:238033 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |