Sequence 1: | NP_001287593.1 | Gene: | ca / 43518 | FlyBaseID: | FBgn0000247 | Length: | 1961 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012813982.2 | Gene: | rccd1 / 100135212 | XenbaseID: | XB-GENE-877111 | Length: | 411 | Species: | Xenopus tropicalis |
Alignment Length: | 215 | Identity: | 55/215 - (25%) |
---|---|---|---|
Similarity: | 94/215 - (43%) | Gaps: | 51/215 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 1148 SAQKSTEP--------PEPAHAVKSLDLLSQLNLQVHAIK--CGRQHTLILTNNGLYSLGNNNLC 1202
Fly 1203 QLGIGRHMQM-------ALQPMLVTALDGMNITMLEAGQYHNAAVAD-GKLYMWGWGIYGQLGQG 1259
Fly 1260 SCE----NIATPQ------------LVSFFKFKKILQISLGHAHTLVLCGAPNSHMEANHCGNEL 1308
Fly 1309 FVFGSNHFGQLGTGNSDHGD 1328 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ca | NP_001287593.1 | ATS1 | 1158..1588 | CDD:227511 | 50/197 (25%) |
RCC1_2 | 1175..1200 | CDD:290274 | 7/26 (27%) | ||
RCC1 | 1193..1240 | CDD:278826 | 14/53 (26%) | ||
RCC1 | 1242..1291 | CDD:278826 | 13/65 (20%) | ||
RCC1_2 | 1503..1532 | CDD:290274 | |||
RCC1 | 1522..1568 | CDD:278826 | |||
RCC1_2 | 1558..1584 | CDD:290274 | |||
rccd1 | XP_012813982.2 | ATS1 | <201..373 | CDD:227511 | 47/178 (26%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |