Protein Alignment ca and herc3

DIOPT Version :9

• Sequence 1: NP_001287593.1
• Gene: ca / 43518
• FlyBaseID: FBgn0000247
• Length: 1961
• Species: Drosophila melanogaster
• Sequence 2: NP_001139096.1
• Gene: herc3 / 100003587
• ZFINID: ZDB-GENE-090313-139
• Length: 1046
• Species: Danio rerio
• Alignment Length: 475
• Identity: 110/475 - (23%)
• Similarity: 162/475 - (34%)
• Gaps: 189/475 - (39%)

  Fly  1138 WGSSGIPSYYSAQKSTEPPEPAHAVKSLDLLSQLNLQVHAIKCGRQHTLILTNNG-LYSLGNNNL 1201
            |||||..............||    :|..:.....|:  .:.||.||:|.|.::| :|:.|:|:.
Zfish     5 WGSSGAGQLGIGASEASVFEP----RSCCVFDGRGLK--EVACGNQHSLFLLHDGSVYTCGSNSC 63

  Fly  1202 CQLGIGRHMQMALQPMLVTALDGMNITMLEAGQYHNAAVAD-GKLYMWGWGIYGQLGQGSCEN-I 1264
            .|||   |.:...:|.||.|||...|:.:..||.|:.||.: |:::.||.|..||||.|:.|. :
Zfish    64 GQLG---HDKGGSRPELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAV 125

  Fly  1265 ATPQLVSFFKFKKILQISLGHAHTLVLCGAPNSHMEANHCGNELFVFGSNHFGQLGTGNSDHGDT 1329
            ..|:|:     ||:.:    |..:.|:||  |.|..|.....:|||:|.|..||||.|..:
Zfish   126 RVPRLI-----KKLCE----HRISQVMCG--NHHCIALSKDGQLFVWGENSSGQLGLGKGE---- 175

  Fly  1330 KTNLPVRLEVGDCSLRLIHTKFFTNLAVDEQDRLFTWGSSPQALRLANQIKRRANAKQKMEENQQ 1394
                                                                             
Zfish   176 ----------------------------------------------------------------- 175

  Fly  1395 RELLSKQLEATLLPAPIPSTSTLVEPTTSYAAVVAGSTPKSSVSDTKDCQDVQNEAAPSDATETI 1459
                    .:||.|.|:.|...:  |.|
Zfish   176 --------PSTLSPQPLKSLCGI--PLT------------------------------------- 193

  Fly  1460 APASAKAAPPPVPVASPPVLVPEPDPTEHLTPHLVDTSEVAGRILQISSGLFHFCLISSSCTLYT 1524
                                                         |||:|..|...:|.|..::.
Zfish   194 ---------------------------------------------QISAGGDHSFALSFSGAVFG 213

  Fly  1525 WGKNLEHQLGTEDKDRRAVLKPSPIDSI--ERPMYVDCGSDFTLVMTTDHVVRAFGGNSNGQCGR 1587
            ||||...|||..|:..|||  |..|..:  ::.:|:.||.:.|..:|.:..:..||..|.||.|.
Zfish   214 WGKNSAGQLGLNDEQDRAV--PCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGH 276

  Fly  1588 DLGPSVERMRQRVVCLPATK 1607
            | ....|.:.:||:.|..|:
Zfish   277 D-STRNEPLPRRVMELMGTE 295

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ca	NP_001287593.1	ATS1	1158..1588	CDD:227511	98/434 (23%)
		RCC1_2	1175..1200	CDD:290274	9/25 (36%)
		RCC1	1193..1240	CDD:278826	17/46 (37%)
		RCC1	1242..1291	CDD:278826	15/50 (30%)
		RCC1_2	1503..1532	CDD:290274	11/28 (39%)
		RCC1	1522..1568	CDD:278826	17/47 (36%)
		RCC1_2	1558..1584	CDD:290274	7/25 (28%)
herc3	NP_001139096.1	RCC1	4..49	CDD:278826	14/49 (29%)
		RCC1_2	37..65	CDD:290274	10/29 (34%)
		RCC1	52..99	CDD:278826	18/49 (37%)
		RCC1	103..152	CDD:278826	20/59 (34%)
		RCC1	155..205	CDD:278826	22/210 (10%)
		RCC1	208..257	CDD:278826	18/50 (36%)
		RCC1	260..308	CDD:278826	12/37 (32%)
		RCC1	314..374	CDD:278826
		HECTc	699..1044	CDD:238033
		HECTc	723..1043	CDD:214523

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1062377at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	1.010