DRSC/TRiP Functional Genomics Resources

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Protein Alignment ncd and AT1G18410

DIOPT Version :9

Sequence 1:NP_001287592.1 Gene:ncd / 43517 FlyBaseID:FBgn0002924 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001322886.1 Gene:AT1G18410 / 838422 AraportID:AT1G18410 Length:1153 Species:Arabidopsis thaliana


Alignment Length:546 Identity:184/546 - (33%)
Similarity:280/546 - (51%) Gaps:78/546 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 DLLEKHKVLKTKYEKQTEDM--------GELESMPQQLE------ETQNKLIETESSLKNTQSDN 251
            :|.||.|.|: ||:.:|..:        .|||...|:..      |.||:  |.|.::|.|.:.|
plant   435 NLEEKVKELQ-KYKDETITVTTSIEGKNRELEQFKQETMTVTTSLEAQNR--ELEQAIKETMTVN 496

  Fly   252 ECLQ---RQVKQHTAKIETITSTLGRTKEELSELQAIHEKVKTEHAALSTEVVHLRQRT------ 307
            ..|:   |:::|...:..|:.::|.....|| |...:|.|.|.:.....:|   |:.|:      
plant   497 TSLEAKNRELEQSKKETMTVNTSLKAKNREL-EQNLVHWKSKAKEMEEKSE---LKNRSWSQKEL 557

  Fly   308 ------------------------EELLRCNEQQAAELETCKEQLFQSN----------MERKEL 338
                                    :|:|:..::...|......:|.:..          .|.::|
plant   558 SYRSFISFQCQALQELRFYSKSIKQEILKVQDKYTVEFSQLGRKLLELGDAAANYHEVLTENQKL 622

  Fly   339 HNTVMDLRGNIRVFCRIRPPLESEENRMCCTWTYHDESTVELQSIDAQAKSKMGQQIFSFDQVFH 403
            .|.:.:|:|||||:||:||.|..:....  |...|.....||..::.....|...:.|.|::|:.
plant   623 FNELQELKGNIRVYCRVRPFLRGQGASK--TVVEHIGDHGELVVLNPTKPGKDAHRKFRFNKVYS 685

  Fly   404 PLSSQSDIFEMVSPLIQSALDGYNICIFAYGQTGSGKTYTM---DGVPESV-GVIPRTVDLLFDS 464
            |.|:|:::|..:.|||:|.|||||:||||||||||||||||   ||..|.. ||..|.::.|| .
plant   686 PASTQAEVFSDIKPLIRSVLDGYNVCIFAYGQTGSGKTYTMTGPDGASEEEWGVNYRALNDLF-R 749

  Fly   465 IRGYRNLGWEYEIKATFLEIYNEVLYDLLSNE--QKDMEIRMAKNNKNDIYVSNITEETVLDPNH 527
            |...|.....||:....:|||||.:.||||.:  ||.:.| ::...:|.:.|.:.:...|...:.
plant   750 ISQSRKSNIAYEVGVQMVEIYNEQVRDLLSGDSSQKKLGI-LSTTQQNGLAVPDASMYPVTSTSD 813

  Fly   528 LRHLMHTAKMNRATASTAGNERSSRSHAVTKLELIGRHAEKQEISVGSINLVDLAGSE----SPK 588
            :..||.....||..:|||.||||||||::..:.:.|:..:......|:::||||||||    |..
plant   814 VLELMSIGLQNRVVSSTALNERSSRSHSIVTVHVRGKDLKTGSALYGNLHLVDLAGSERVDRSEV 878

  Fly   589 TSTRMTETKNINRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDC 653
            |..|:.|.::||:|||.|.:||.:|..|..|:||||||||.||..||||.:|||||:.::|....
plant   879 TGDRLKEAQHINKSLSALGDVIFSLASKSSHVPYRNSKLTQLLQSSLGGRAKTLMFVQLNPDITS 943

  Fly   654 FQESVKSLRFAASVNSCKMTKAKRNR 679
            :.||:.:|:||..|:..::..||.::
plant   944 YSESMSTLKFAERVSGVELGAAKSSK 969

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ncdNP_001287592.1 KISc_C_terminal 346..672 CDD:276817 140/335 (42%)
KISc 348..678 CDD:214526 141/339 (42%)
AT1G18410NP_001322886.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0239
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D364605at2759
OrthoFinder 1 1.000 - - FOG0000325
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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