DRSC/TRiP Functional Genomics Resources

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Protein Alignment ncd and AT5G27550

DIOPT Version :9

Sequence 1:NP_001287592.1 Gene:ncd / 43517 FlyBaseID:FBgn0002924 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001318663.1 Gene:AT5G27550 / 832815 AraportID:AT5G27550 Length:765 Species:Arabidopsis thaliana


Alignment Length:454 Identity:163/454 - (35%)
Similarity:251/454 - (55%) Gaps:28/454 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   241 ESSLKNTQSDNECLQRQVKQHTAKIETITSTLGRTKEELSELQAIHEKV---KTEHAALSTEVVH 302
            |.|:.|..||  .::......|:..:.::...|.|...|.::....:|:   |.|||.:|.:|..
plant    21 EVSVNNHNSD--AVEESEDTITSGNQEVSPANGPTLPILQKIIDCSDKIKILKDEHALVSNQVQE 83

  Fly   303 LRQRT---EELLRCNEQQAAELETCKEQLFQSNMERKELHNTVMDLRGNIRVFCRIRPPLESEEN 364
            ::..:   .|:.|..:....:|...::|..:.:.|||.|:|.|::|:||||||||.||..::|..
plant    84 IKNCSLVEPEISRALQLLTTKLGALEKQYLEESSERKRLYNEVIELKGNIRVFCRCRPLNQAEIA 148

  Fly   365 RMCCTWTYHD---ESTVELQSIDAQAKSKMGQQIFSFDQVFHPLSSQSDIFEMVSPLIQSALDGY 426
            ..|.:....|   |:.:::.|.|:..|.      |.||.||.|...|..:|....|::.|.||||
plant   149 NGCASVAEFDTTQENELQILSSDSSKKH------FKFDHVFKPDDGQETVFAQTKPIVTSVLDGY 207

  Fly   427 NICIFAYGQTGSGKTYTMDGVPESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNEVLYD 491
            |:|||||||||:|||:||:|.||:.||..||::.||.......:| .::|:..:.||:|||.:.|
plant   208 NVCIFAYGQTGTGKTFTMEGTPENRGVNYRTLEELFRCSESKSHL-MKFELSVSMLEVYNEKIRD 271

  Fly   492 LL---SNE-QKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNERSSR 552
            ||   ||: .|.:|::.:.....:  |..:.|..|.:.:.:..|:......|:..|||.||:|||
plant   272 LLVDNSNQPPKKLEVKQSAEGTQE--VPGLVEAQVYNTDGVWDLLKKGYAVRSVGSTAANEQSSR 334

  Fly   553 SHAVTKLELIGRHAEKQEISVGSINLVDLAGSES----PKTSTRMTETKNINRSLSELTNVILAL 613
            ||.:.::.:.|.:....:.:...:.||||||||.    .....|:.|::.||:|||.|.:||.||
plant   335 SHCLLRVTVKGENLINGQRTRSHLWLVDLAGSERVGKVEVEGERLKESQFINKSLSALGDVISAL 399

  Fly   614 LQKQDHIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASVNSCKMTKAKR 677
            ..|..|||||||||||:|..||||:.|||||:.:||......|::.||.||:.|...:...|::
plant   400 ASKTSHIPYRNSKLTHMLQNSLGGDCKTLMFVQISPSSADLGETLCSLNFASRVRGIESGPARK 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ncdNP_001287592.1 KISc_C_terminal 346..672 CDD:276817 135/336 (40%)
KISc 348..678 CDD:214526 135/341 (40%)
AT5G27550NP_001318663.1 KISc_C_terminal 130..457 CDD:276817 135/335 (40%)
ATG16 <464..537 CDD:400781 163/454 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0239
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D364605at2759
OrthoFinder 1 1.000 - - FOG0000325
OrthoInspector 1 1.000 - - otm2680
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.820

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