DRSC/TRiP Functional Genomics Resources

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Protein Alignment ncd and ATK2

DIOPT Version :9

Sequence 1:NP_001287592.1 Gene:ncd / 43517 FlyBaseID:FBgn0002924 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001328096.1 Gene:ATK2 / 828826 AraportID:AT4G27180 Length:745 Species:Arabidopsis thaliana


Alignment Length:715 Identity:228/715 - (31%)
Similarity:347/715 - (48%) Gaps:161/715 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 NQTYCGNL---LPPLSRDLNNLPQVLERRGGGARA--ASPEPMKLGHRAKLRRSRSACDINELRG 105
            |:.:|.:|   |.....:||.:...|.:.....:.  |..:..||.....|.:.|.|        
plant    97 NEKHCADLEVNLKVKEEELNMVIDELRKNFASVQVQLAKEQTEKLAANESLGKEREA-------- 153

  Fly   106 NKRTAAAPSLPSIPSKVSRLGGALTVSSQRLVRPAAPSSITATAVKRPPVTRPAPRAAGGAAAKK 170
              |.|......:|..::::..|.|..::||:                                  
plant   154 --RIAVESLQAAITEELAKTQGELQTANQRI---------------------------------- 182

  Fly   171 PAGTGAAASSGAAAAAPKRIAPYDFKARFH------DLLEKHKVLKTKYEKQT---EDMGEL--- 223
                      .|.....|.:..|:...:.:      ||.|.|:.:|...:::|   |.:|.|   
plant   183 ----------QAVNDMYKLLQEYNSSLQLYNSKLQGDLDEAHENIKRGEKERTGIVESIGNLKGQ 237

  Fly   224 ---------------ESMPQQLEETQNKLIETESSLKNTQSDN-------ECLQRQ-VKQHTAK- 264
                           :.:.:|.:|..|:::..:..::..:.|.       |.||.: .||:..| 
plant   238 FKALQDQLAASKVSQDDVMKQKDELVNEIVSLKVEIQQVKDDRDRHITEIETLQAEATKQNDFKD 302

  Fly   265 ----IETITSTLGRTKEELSELQAIHEKVKTEHAALST------------EVVHLRQRTEELLRC 313
                :|:..|...:..|||.: |.:..:.|.:.|.|||            .::.|:.|.||    
plant   303 TINELESKCSVQNKEIEELQD-QLVASERKLQVADLSTFEKMNEFEEQKESIMELKGRLEE---- 362

  Fly   314 NEQQAAELETCKEQLFQSNMERKELHNTVMDLRGNIRVFCRIRPPLESEENRMCCTWTYHDESTV 378
                 |||     :|.:....||:||||:.:|:||||||||:||.|..|.:.       .:..|:
plant   363 -----AEL-----KLIEGEKLRKKLHNTIQELKGNIRVFCRVRPLLSGENSS-------EEAKTI 410

  Fly   379 EL-QSIDAQAKS----KMGQ-QIFSFDQVFHPLSSQSDIFEMVSPLIQSALDGYNICIFAYGQTG 437
            .. .|::|..:.    :.|| ..|:||:||.|.:||.|:|..:|.|:|||||||.:|||||||||
plant   411 SYPTSLEALGRGIDLLQNGQSHCFTFDKVFVPSASQEDVFVEISQLVQSALDGYKVCIFAYGQTG 475

  Fly   438 SGKTYTM---DGVPESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNEVLYDLLSNEQKD 499
            |||||||   .|.|:..|:|||.::.:|.:.:..|:.||:||::.:.||||||.:.||||..:  
plant   476 SGKTYTMMGRPGNPDEKGLIPRCLEQIFQTRQSLRSQGWKYELQVSMLEIYNETIRDLLSTNK-- 538

  Fly   500 MEIRMAKNN--------KNDIY-VSNITEETVLD---PNHLRHLMHTAKMNRATASTAGNERSSR 552
             |...|.|.        |:|.. .:::.|.||:|   ...:..|:..|..||:...||.||:|||
plant   539 -EAVRADNGVSPQKYAIKHDASGNTHVVELTVVDVRSSKQVSFLLDHAARNRSVGKTAMNEQSSR 602

  Fly   553 SHAVTKLELIGRHAEKQEISVGSINLVDLAGSE----SPKTSTRMTETKNINRSLSELTNVILAL 613
            ||.|..|::.|.:...::...|.:||:||||||    |..|..|:.||:.||:|||.|.:||.||
plant   603 SHFVFTLKISGFNESTEQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLGDVIFAL 667

  Fly   614 LQKQDHIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASVNSCKMTKAKRN 678
            .:|:||:|:||||||:||.|.|||:||||||:|::|......||:.||||||.||:|::..|.|:
plant   668 AKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNITPEPSSTGESLCSLRFAARVNACEIGTAHRH 732

  Fly   679  678
            plant   733  732

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ncdNP_001287592.1 KISc_C_terminal 346..672 CDD:276817 158/350 (45%)
KISc 348..678 CDD:214526 158/354 (45%)
ATK2NP_001328096.1 Smc <77..389 CDD:224117 70/360 (19%)
KISc_C_terminal 385..726 CDD:276817 158/350 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 248 1.000 Domainoid score I532
eggNOG 1 0.900 - - E2759_KOG0239
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H83229
Inparanoid 1 1.050 302 1.000 Inparanoid score I778
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D364605at2759
OrthoFinder 1 1.000 - - FOG0000325
OrthoInspector 1 1.000 - - otm2680
orthoMCL 1 0.900 - - OOG6_101893
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1242
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.730

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