DRSC/TRiP Functional Genomics Resources

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Protein Alignment ncd and AT3G10310

DIOPT Version :9

Sequence 1:NP_001287592.1 Gene:ncd / 43517 FlyBaseID:FBgn0002924 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001325950.1 Gene:AT3G10310 / 820193 AraportID:AT3G10310 Length:969 Species:Arabidopsis thaliana


Alignment Length:517 Identity:180/517 - (34%)
Similarity:275/517 - (53%) Gaps:60/517 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 KARFHDLL----EKHKVLKTKYEKQTEDMGELESMPQQLEETQNKLIETESSLKNTQSDNEC-LQ 255
            :|.|..:|    |...|.|....:.|....:|:|||  |||.  .:.|.:.|.::.....:| .:
plant   231 RANFEKILSRFPELQSVFKNLLSEGTLKPSDLKSMP--LEEL--PVHEEDQSSRSLSHKTKCNHK 291

  Fly   256 RQVKQHTAKIETITSTLGRTKEELSELQAIHEKVKTEHAALSTEVVHLRQRTEELLRCNEQQAAE 320
            |.:|....::..:.:...:||::..|.|                 |:|::...||    ..|..|
plant   292 RLLKTQEKELAVLKNLFIKTKQDFKEFQ-----------------VYLQRDLMEL----GNQMQE 335

  Fly   321 LETCKEQLFQSNMERKELHNTVMDLRGNIRVFCRIRPPLESEENRMCCTWTYHDESTVELQSIDA 385
            :.:..:..::...|.::|:|.|.||:|||||:||:||...||.:.: ..:...|.|   |..:|.
plant   336 MSSAAQGYYKVVEENRKLYNMVQDLKGNIRVYCRVRPIFNSEMDGV-IDYIGKDGS---LFVLDP 396

  Fly   386 QAKSKMGQQIFSFDQVFHPLSSQSDIFEMVSPLIQSALDGYNICIFAYGQTGSGKTYTMDGVP-- 448
            ....|..::.|.|:|||.|.::|.|:|....|||:|.:||||:||||||||||||||||.|.|  
plant   397 SKPYKDARKTFQFNQVFGPTATQDDVFRETQPLIRSVMDGYNVCIFAYGQTGSGKTYTMSGPPGR 461

  Fly   449 --ESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNEVLYDLLSNEQK--DMEIRMAKNNK 509
              ..:|:....:..|| .|...|.....|||....:|||||.:.|||:....  .::||...::.
plant   462 SATEMGINYLALSDLF-LICDRRKDMMTYEIYVQMVEIYNEQVRDLLAENSSCTRLDIRTCSSDD 525

  Fly   510 NDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNERSSRSHAVTKLELIGRHAEKQEISVG 574
            :.:.:.:.|..:|.....:..||...::|||.:||:.|.||||||::..:     |...::.|.|
plant   526 DGLSLPDATMHSVNSTKDVLQLMEAGEVNRAVSSTSMNNRSSRSHSIFMV-----HVRGKDTSGG 585

  Fly   575 S----INLVDLAGSE----SPKTSTRMTETKNINRSLSELTNVILALLQKQDHIPYRNSKLTHLL 631
            :    ::||||||||    |..|..|:.|.:.||:|||.|.:||.||.||..||||||||||.||
plant   586 TLRSCLHLVDLAGSERVDKSEVTGDRLKEAQYINKSLSCLGDVISALAQKNSHIPYRNSKLTLLL 650

  Fly   632 MPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASVNSCKMTKAKRNR------YLNNSVAN 687
            ..||||.:|||||.::||.:|.|.|::.:|:||..|::.::..|:.::      :|...:.|
plant   651 QDSLGGQAKTLMFAHLSPEEDSFGETISTLKFAQRVSTVELGAARAHKETREVMHLKEQIEN 712

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ncdNP_001287592.1 KISc_C_terminal 346..672 CDD:276817 142/339 (42%)
KISc 348..678 CDD:214526 142/343 (41%)
AT3G10310NP_001325950.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0239
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D364605at2759
OrthoFinder 1 1.000 - - FOG0000325
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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