DRSC/TRiP Functional Genomics Resources

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Protein Alignment ncd and KIF21A

DIOPT Version :9

Sequence 1:NP_001287592.1 Gene:ncd / 43517 FlyBaseID:FBgn0002924 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001365368.1 Gene:KIF21A / 55605 HGNCID:19349 Length:1675 Species:Homo sapiens


Alignment Length:400 Identity:138/400 - (34%)
Similarity:191/400 - (47%) Gaps:75/400 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   348 NIRVFCRIRPPLESEENRMC--CTWTYHDESTVELQSIDAQAKSKMGQQIFSFDQVFHPLSSQSD 410
            ::||..||||.|..|:...|  ||.....|..|.|      .|.|    .|:||.||...|.|..
Human     9 SVRVAVRIRPQLAKEKIEGCHICTSVTPGEPQVFL------GKDK----AFTFDYVFDIDSQQEQ 63

  Fly   411 IF-EMVSPLIQSALDGYNICIFAYGQTGSGKTYTM------DGVPESVGVIPRTVDLLFDSIRGY 468
            |: :.:..||:...:|||..:|||||||:||||||      :.|.|.:|:|.|.|..||.||...
Human    64 IYIQCIEKLIEGCFEGYNATVFAYGQTGAGKTYTMGTGFDVNIVEEELGIISRAVKHLFKSIEEK 128

  Fly   469 RNLGW-------EYEIKATFLEIYNEVLYDL------LSNEQKDMEIRMAKNNKNDIYVSNITEE 520
            :::..       ::::.|.|||:|||.:.||      :..:.|...||:.:::...||...:|..
Human   129 KHIAIKNGLPAPDFKVNAQFLELYNEEVLDLFDTTRDIDAKSKKSNIRIHEDSTGGIYTVGVTTR 193

  Fly   521 TVLDPNHLRHLMHTAKMNRATASTAGNERSSRSHAV-------------------TKLELIGRHA 566
            ||...:.:...:....::|.||||..|.:||||||:                   |..::|...|
Human   194 TVNTESEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHVCQTRVCPQIDADNATDNKIISESA 258

  Fly   567 EKQEIS--VGSINLVDLAGSESPK----TSTRMTETKNINRSLSELTNVILALLQKQ---DHIPY 622
            :..|..  ....:.|||||||..|    |..|..|..:||..|..|.|||.||..|.   .|:||
Human   259 QMNEFETLTAKFHFVDLAGSERLKRTGATGERAKEGISINCGLLALGNVISALGDKSKRATHVPY 323

  Fly   623 RNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASVNSCKMTKAKRNRYLNNSVA- 686
            |:||||.||..||||||:|:|...|||....|.|::.:|::           |.|.|.:.|.|. 
Human   324 RDSKLTRLLQDSLGGNSQTIMIACVSPSDRDFMETLNTLKY-----------ANRARNIKNKVMV 377

  Fly   687 ---NSSTQSN 693
               .:|.|.|
Human   378 NQDRASQQIN 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ncdNP_001287592.1 KISc_C_terminal 346..672 CDD:276817 130/373 (35%)
KISc 348..678 CDD:214526 131/379 (35%)
KIF21ANP_001365368.1 KISc_KIF4 8..372 CDD:276823 133/383 (35%)
Cast <364..836 CDD:401982 7/34 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 556..641
Smc <644..1004 CDD:224117
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 779..804
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 841..881
Rcc_KIF21A 936..1017 CDD:410204
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1116..1138
Interaction with KANK1 and KANK2. /evidence=ECO:0000269|PubMed:29183992 1146..1167
WD40 1340..1653 CDD:238121
WD 1 1346..1383
WD 2 1386..1424
WD40 repeat 1391..1450 CDD:293791
WD 3 1450..1488
WD40 repeat 1456..1491 CDD:293791
WD 4 1491..1533
WD40 repeat 1496..1540 CDD:293791
WD 5 1542..1579
WD40 repeat 1548..1581 CDD:293791
WD 6 1583..1622
WD40 repeat 1588..1624 CDD:293791
WD 7 1625..1662
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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