DRSC/TRiP Functional Genomics Resources

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Protein Alignment ncd and Kif19A

DIOPT Version :9

Sequence 1:NP_001287592.1 Gene:ncd / 43517 FlyBaseID:FBgn0002924 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_996208.1 Gene:Kif19A / 41717 FlyBaseID:FBgn0038205 Length:750 Species:Drosophila melanogaster


Alignment Length:368 Identity:117/368 - (31%)
Similarity:177/368 - (48%) Gaps:59/368 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   351 VFCRIRPPLESEENRMCCTWTYHDESTVELQS-----IDAQAKSKMGQQIFSFDQVFHPLSSQSD 410
            |..|:||.:|:.|.   |         :|:.|     .|...||:..|  :|:|.||....||..
  Fly    38 VAVRVRPSMEATER---C---------IEVISGGSLLYDDGGKSRPRQ--YSYDHVFRENDSQEQ 88

  Fly   411 IFE-MVSPLIQSALDGYNICIFAYGQTGSGKTYTMDG-VP-----------------------ES 450
            ::: ..:||::..|:|.|..:||||.||||||:||.| ||                       :.
  Fly    89 VYKTTTAPLVRDVLNGLNAAVFAYGATGSGKTHTMLGPVPRKKPQTSDRAPPTASCDSTDVSSQD 153

  Fly   451 VGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNEVLYDLLSNEQKDMEIRMAKNNKNDIYVS 515
            :|::.|.::.:|..|....  .:...:..::||||||::.||| |....:|:|.....:. |.|:
  Fly   154 IGLMVRAIEDIFSHIESAE--AYSCRVSISYLEIYNELIRDLL-NPGGPLELREDHRGQR-ITVA 214

  Fly   516 NITEETVLDPNHLRHLMHTAKMNRATASTAGNERSSRSHAVTKLELIGRH--AEKQEISVGSINL 578
            .::|.|......:..|:......|....||.|:.||||||:..:.:..|.  ..||    |.:.|
  Fly   215 GLSEITTSSRKEVVSLLLKGNKARTMEPTAANQTSSRSHALLSIMVQARTPLGTKQ----GRLFL 275

  Fly   579 VDLAGSESPKTS----TRMTETKNINRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNS 639
            .||||||..|.:    .|:.|..:|||||..|.|||..|.....::.||:||||.||..:|.|..
  Fly   276 TDLAGSERAKKTKNRGKRLQEGAHINRSLLALGNVINGLSGGARYVNYRDSKLTRLLKEALSGRC 340

  Fly   640 KTLMFINVSPFQDCFQESVKSLRFAASVNSCKMTKAKRNRYLN 682
            ||:|..:|:|......|:..:|.:|...||. .||.:.:.|::
  Fly   341 KTVMIAHVAPESKHRDETKNTLVYADRANSI-TTKLQNSVYID 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ncdNP_001287592.1 KISc_C_terminal 346..672 CDD:276817 114/356 (32%)
KISc 348..678 CDD:214526 116/362 (32%)
Kif19ANP_996208.1 Motor_domain 35..371 CDD:277568 113/354 (32%)
Kinesin 41..371 CDD:278646 112/351 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437977
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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