DRSC/TRiP Functional Genomics Resources

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Protein Alignment ncd and kif18a

DIOPT Version :9

Sequence 1:NP_001287592.1 Gene:ncd / 43517 FlyBaseID:FBgn0002924 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_956533.1 Gene:kif18a / 393209 ZFINID:ZDB-GENE-040426-862 Length:895 Species:Danio rerio


Alignment Length:358 Identity:121/358 - (33%)
Similarity:182/358 - (50%) Gaps:42/358 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   348 NIRVFCRIRPPLESE------------ENRMCCTWTYHDESTV----ELQSIDAQAKSKMGQQIF 396
            :::|..|:||..:.|            :|.|.......:|.|.    .:.:.|.:.::....: |
Zfish     9 HVKVVVRVRPLNDKEKDGNFKKVVHVVDNHMLVFDPKEEEVTFFRGQRVGNRDVRKRANKDLK-F 72

  Fly   397 SFDQVFHPLSSQSDIFE-MVSPLIQSALDGYNICIFAYGQTGSGKTYTMDGVPESVGVIPRTVDL 460
            .||.||...|||.::|| ....::...|:|||..:||||.||:|||:||.|...|.||:..|:..
Zfish    73 VFDSVFGEESSQIEVFENTTKAIVDGVLNGYNCTVFAYGATGAGKTHTMLGTSNSPGVMFLTMKE 137

  Fly   461 LF---DSIRGYRNLGWEYEIKATFLEIYNEVLYDLLSNEQKDMEIRMAKNNKNDIYVSNITEETV 522
            ||   |.|:..:    .:.:..::||:|||.:.|||:|..   .:.:.::..|.:.|..:|....
Zfish   138 LFARMDLIKEDK----VFNVAFSYLEVYNEQIRDLLTNSG---PLAVREDGSNGVVVQGLTLHQP 195

  Fly   523 LDPNHLRHLMHTAKMNRATASTAGNERSSRSHAVTKLELIGRHAEK-----QEISVGSINLVDLA 582
            ....|:...:.....||....|..|..|||||||.::.|  |..:|     ..:.|..::|:|||
Zfish   196 KSAEHILEALDYGNRNRTQHPTDMNATSSRSHAVFQIYL--RQQDKTASLNPNVRVAKMSLIDLA 258

  Fly   583 GSE-SPKTST---RMTETKNINRSLSELTNVILALLQ---KQDHIPYRNSKLTHLLMPSLGGNSK 640
            ||| :..|:|   |:.|..||||||..|.|||..|..   |:.|||||:||||.||..|||||.:
Zfish   259 GSERASATNTKGARLREGANINRSLLALGNVINTLANPKCKKTHIPYRDSKLTRLLKDSLGGNCR 323

  Fly   641 TLMFINVSPFQDCFQESVKSLRFAASVNSCKMT 673
            |:|..||||....::::..:|::|......|.|
Zfish   324 TVMIANVSPSSLSYEDTHNTLKYANRAKEIKST 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ncdNP_001287592.1 KISc_C_terminal 346..672 CDD:276817 119/355 (34%)
KISc 348..678 CDD:214526 121/358 (34%)
kif18aNP_956533.1 KISc 9..354 CDD:214526 119/354 (34%)
KISc_KIP3_like 9..353 CDD:276821 119/353 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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