Protein Alignment ncd and pav

DIOPT Version :9

• Sequence 1: NP_001287592.1
• Gene: ncd / 43517
• FlyBaseID: FBgn0002924
• Length: 700
• Species: Drosophila melanogaster
• Sequence 2: NP_477025.1
• Gene: pav / 38515
• FlyBaseID: FBgn0011692
• Length: 887
• Species: Drosophila melanogaster
• Alignment Length: 463
• Identity: 120/463 - (25%)
• Similarity: 196/463 - (42%)
• Gaps: 114/463 - (24%)

  Fly   336 KELHNTVMDLRGNIRVFCRIRPPLESEENRMCCTWTYHDESTVELQSID---AQAKSKMGQQ--- 394
            |:..:|....|..:.||||:| ||:|:.:  ..:....:.:|:.|...|   ...|...|.|
  Fly    24 KQRRDTSDKARDPVNVFCRVR-PLQSDAD--LTSLRVKNSTTIALNPQDQLLQHHKPHNGAQREV 85

  Fly   395 IFSFDQVFHPLSSQSDIFEMVS-PLIQSALDGYNICIFAYGQTGSGKTYTMDGVPESVGVIPRTV 458
            .:.|..||.|.::|.|::..|: ||:::.|.|.|..:|.||.|||||||||.|.....|::||.:
  Fly    86 QYIFKHVFQPDATQQDVYAAVAQPLVENLLKGRNSLLFTYGVTGSGKTYTMTGNLRHRGIMPRCL 150

  Fly   459 DLLF---------------DSIRGYRNLGWE---------------------------------- 474
            |:||               |.:.|:..|..|
  Fly   151 DVLFRTISDYQAKKFVFKPDKLNGFEILSEEDALLERQHEMNQRFAGSGRFAFRHKDSDPEIASQ 215

  Fly   475 ----------------YEIKATFLEIYNEVLYDLL--SNEQKDMEIRMAKNNKN-DIYVSNITEE 520
                            |.:..|::||||..:||||  |..||.::.::.:.:.| .::|..:||.
  Fly   216 ASVEPIPLLGLDEDNMYSVFVTYIEIYNNSVYDLLEDSGIQKTLQSKIIREDANRHMFVHGVTEV 280

  Fly   521 TVLDPNHLRHLMHTAKMNRATASTAGNERSSRSHAVTKLELI-------GRHA--EKQEISVGSI 576
            .|........:....:..:....|..|..|||||:|..:.|:       |.:.  ::|.|:|..:
  Fly   281 EVKTVEDALEVFQMGQKRKRMGHTVLNAESSRSHSVFNIRLVQAPTDSQGENVVQDRQNITVSQL 345

  Fly   577 NLVDLAGSE----SPKTSTRMTETKNINRSLSELTNVILALLQKQ---------DHIPYRNSKLT 628
            :||||||||    :..|..|:.|..|||.||..|...:..|.:.|         ..:|||:||:|
  Fly   346 SLVDLAGSERSSRTKNTGVRLREAGNINNSLMTLRTCLEYLRENQLAASNGLAPKKVPYRDSKIT 410

  Fly   629 HLLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASVNSCKMTKA--------------KRNR 679
            |:......|..:..|.:.::|..:.:.|:::.::||......::.:|              |.|:
  Fly   411 HMFKNYFDGEGQVSMIVCINPRIEDYDENMQVMKFAEMTQEVQIARATPMKQDLGLTPGRRKANK 475

  Fly   680 YLNNSVAN 687
            ....:|.|
  Fly   476 LFKIAVNN 483

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ncd	NP_001287592.1	KISc_C_terminal	346..672	CDD:276817	113/422 (27%)
		KISc	348..678	CDD:214526	114/440 (26%)
pav	NP_477025.1	KISc_KIF23_like	35..450	CDD:276819	112/417 (27%)
		Kinesin	42..452	CDD:278646	109/412 (26%)
		MKLP1_Arf_bdg	735..837	CDD:293148

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45437964
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840