DRSC/TRiP Functional Genomics Resources

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Protein Alignment ncd and KIFC1

DIOPT Version :9

Sequence 1:NP_001287592.1 Gene:ncd / 43517 FlyBaseID:FBgn0002924 Length:700 Species:Drosophila melanogaster
Sequence 2:XP_016866325.1 Gene:KIFC1 / 3833 HGNCID:6389 Length:674 Species:Homo sapiens


Alignment Length:694 Identity:240/694 - (34%)
Similarity:347/694 - (50%) Gaps:123/694 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 GNLLPPLSRDLNNLPQVLERRGGGARAASPEPMKLGHRAKLRRSRSACDINELRGNKRTAAAPSL 115
            ||:  .|.|.|...|..|...|...: ..|:.|:.|...:.:|:|......::     |.:.|.:
Human    13 GNI--ELKRPLIKAPSQLPLSGSRLK-RRPDQMEDGLEPEKKRTRGLGATTKI-----TTSHPRV 69

  Fly   116 PSIPSKVSRLGGALTVSSQRLVRPAAPSSITATAV----KRP----PV----TRPAPRAAGGAAA 168
            ||: :.|.:..|..|  :|::.:...|...||.|.    ::|    ||    |...|..|||   
Human    70 PSL-TTVPQTQGQTT--AQKVSKKTGPRCSTAIATGLKNQKPVPAVPVQKSGTSGVPPMAGG--- 128

  Fly   169 KKPAGTGAAASSGAAAAAPKRIAPYDFKARFHDLLEKHKVLKTKYEKQTEDMGELESMPQQLEET 233
            |||:               ||.| :|.|.:..||..:.|  :.:...||.|. |.:.:..||.:.
Human   129 KKPS---------------KRPA-WDLKGQLCDLNAELK--RCRERTQTLDQ-ENQQLQDQLRDA 174

  Fly   234 QN--KLIETESS-----LKNTQSDNECLQRQVKQHTAKI----------ETITSTLGRTKEEL-- 279
            |.  |.:.||.:     |...|:..|..|:::|...|.:          |.:...|.:.:.||  
Human   175 QQQVKALGTERTTLEGHLAKVQAQAEQGQQELKNLRACVLELEERLSTQEGLVQELQKKQVELQE 239

  Fly   280 ------SELQAIHEKVKTEHAALST---EVVHLRQRTEELLRCNEQQAAELETCKEQLFQSNMER 335
                  |:|:....:::|..||||:   ||..|||.|       ..|||.|...:|:|....|||
Human   240 ERRGLMSQLEEKERRLQTSEAALSSSQAEVASLRQET-------VAQAALLTEREERLHGLEMER 297

  Fly   336 KELHNTVMDLRGNIRVFCRIRPPLESE--------------------ENRMCCTWTYHDESTVEL 380
            :.|||.:.:|:||||||||:||.|..|                    ..|:..:.:.....|:  
Human   298 RRLHNQLQELKGNIRVFCRVRPVLPGEPTPPPGLLLFPSGPGGPSDPPTRLSLSRSDERRGTL-- 360

  Fly   381 QSIDAQAKSKMGQQIFSFDQVFHPLSSQSDIFEMVSPLIQSALDGYNICIFAYGQTGSGKTYTMD 445
                :.|.:...:..||||:||.|.|.|.::||.::.|:|||||||.:|||||||||||||:||:
Human   361 ----SGAPAPPTRHDFSFDRVFPPGSGQDEVFEEIAMLVQSALDGYPVCIFAYGQTGSGKTFTME 421

  Fly   446 ----GVPESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNEVLYDLLSNEQK-----DME 501
                |.|:..|:|||.:..||...:.....||.|...|:::|||||.:.|||:...:     :.|
Human   422 GGPGGDPQLEGLIPRALRHLFSVAQELSGQGWTYSFVASYVEIYNETVRDLLATGTRKGQGGECE 486

  Fly   502 IRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNERSSRSHAVTKLELIGRHA 566
            ||.|.....::.|:|.....|.....:..|:|.|:.|||.|.||.||||||||:|.:|::.|.|:
Human   487 IRRAGPGSEELTVTNARYVPVSCEKEVDALLHLARQNRAVARTAQNERSSRSHSVFQLQISGEHS 551

  Fly   567 EKQEISVGSINLVDLAGSE--------SPKTSTRMTETKNINRSLSELTNVILALLQKQDHIPYR 623
            .:.......::||||||||        .|....|:.||:.||.|||.|..||:||..|:.|:|||
Human   552 SRGLQCGAPLSLVDLAGSERLDPGLALGPGERERLRETQAINSSLSTLGLVIMALSNKESHVPYR 616

  Fly   624 NSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASV 667
            |||||:||..||||::|.|||:|:||.::...||:.|||||:.|
Human   617 NSKLTYLLQNSLGGSAKMLMFVNISPLEENVSESLNSLRFASKV 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ncdNP_001287592.1 KISc_C_terminal 346..672 CDD:276817 150/359 (42%)
KISc 348..678 CDD:214526 149/357 (42%)
KIFC1XP_016866325.1 SPEC <145..294 CDD:295325 42/158 (27%)
SlyX 215..268 CDD:294687 11/52 (21%)
Microtub_bd 297..>317 CDD:293401 12/19 (63%)
KISc_C_terminal 308..661 CDD:276817 150/359 (42%)
KISc 310..661 CDD:214526 149/357 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 244 1.000 Domainoid score I2202
eggNOG 1 0.900 - - E2759_KOG0239
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H83229
Inparanoid 1 1.050 307 1.000 Inparanoid score I2632
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D181609at33208
OrthoFinder 1 1.000 - - FOG0000325
OrthoInspector 1 1.000 - - oto90762
orthoMCL 1 0.900 - - OOG6_101893
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1242
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1211.730

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