DRSC/TRiP Functional Genomics Resources

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Protein Alignment ncd and Klp59D

DIOPT Version :9

Sequence 1:NP_001287592.1 Gene:ncd / 43517 FlyBaseID:FBgn0002924 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_611762.1 Gene:Klp59D / 37674 FlyBaseID:FBgn0034827 Length:729 Species:Drosophila melanogaster


Alignment Length:581 Identity:150/581 - (25%)
Similarity:234/581 - (40%) Gaps:112/581 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 AVKRPPVTR------PAPRAAGGAAAKK-----PAGTGAAASSGAAAAAPKRIAPYDFKARFHDL 202
            |..:||:::      |.||.:......|     |.........|.:..|.::..|....|..|:|
  Fly    63 AENQPPISKPPSSLLPKPRGSSPTGGPKTHTGNPYAERMRVQDGRSKIATRKTDPAAVGAGNHEL 127

  Fly   203 LEKHKVLKTKYEKQTEDMGELESMPQQLEETQNKLIETESSLKNTQSDNECLQRQVKQHTAKIET 267
            ...|.      .:......:.::.|     ||.         :.:|..|...||        ..:
  Fly   128 GRAHT------PRVPAGRPDRDASP-----TQG---------RKSQGGNNSNQR--------FSS 164

  Fly   268 ITSTLGRTKEELSELQAIHEKVKTEHAAL--------STEV-VHLRQRTEEL----LRCNEQQAA 319
            :...:.|.||:..:.:|...:...|..||        :.|| |.|||....|    |||.:....
  Fly   165 VVREVNRMKEQREKRRARQAEQLQEKDALRRNNPGNPNWEVSVMLRQYRSTLIFSPLRCLDPNGG 229

  Fly   320 ELETCKEQLFQSNMERKELHNTVMDLRGNIRVFCRIRPPLESEENRMCCTWTYHDESTVELQSID 384
            .::.....:.:..|.|||                      |:.:|....|....|...|....:.
  Fly   230 TVQQITVCVRKRPMSRKE----------------------ENSKNLDIITVPSADSLIVHELRLK 272

  Fly   385 AQAKSKMGQQIFSFDQVFHPLSSQSDIFEMVS-PLIQSALDGYNICIFAYGQTGSGKTYTMDG-- 446
            ......:....|.||..|....|.:.:::..: |||::..:|.|...|||||||||||:||.|  
  Fly   273 VDLTKFLEHHKFRFDYTFDEECSNALVYDHTARPLIRTMFEGGNATCFAYGQTGSGKTHTMGGEF 337

  Fly   447 ---VPE-SVGVIPRTVDLLFDSIR--GYRNLGWEYEIKATFLEIYNEVLYDLLSNEQKDMEIRMA 505
               |.: ..|:.......:|:.:.  .||.:|  .:|..:|.|||...::|||. ..|.| :|:.
  Fly   338 FGKVQDCGTGIYAMAARDVFEEVSRPEYRQMG--AKITCSFFEIYGTKVFDLLL-PNKPM-LRVL 398

  Fly   506 KNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNERSSRSHAVTKLEL-----IGRH 565
            ::.:..:.|..:||..|.....:..|:......|.:..|:.|.:|||||||.::.|     .|.|
  Fly   399 EDARQQVVVVGLTEMPVTKVEDVLRLIEHGSKERTSGQTSANAKSSRSHAVFQIALHFPDSWGPH 463

  Fly   566 AEKQEISVGSINLVDLAGSE------SPKTSTRMTETKNINRSLSELTNVILALLQKQDHIPYRN 624
                    |..:.|||||:|      |....||: |...||:||..|...|.||.::..|:|:|.
  Fly   464 --------GKCSFVDLAGNERGADTQSADRQTRI-EGAEINKSLLALKECIRALSRQSSHLPFRG 519

  Fly   625 SKLTHLLMPSL--GGNSKTLMFINVSPFQDCFQESVKSLRFAASVNSCKMTKAKRNRYLNN 683
            ||||.:|..|.  |..:||.|...:||...|.:.::.:||:|..|   |...||.:.:|.:
  Fly   520 SKLTQVLRDSFVGGKKNKTCMIAMISPSMSCVENTLNTLRYADRV---KELIAKEDEHLQS 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ncdNP_001287592.1 KISc_C_terminal 346..672 CDD:276817 103/347 (30%)
KISc 348..678 CDD:214526 106/351 (30%)
Klp59DNP_611762.1 KISc_KIF2_like 233..565 CDD:276818 107/369 (29%)
Kinesin 239..566 CDD:278646 107/364 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437815
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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