DRSC/TRiP Functional Genomics Resources

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Protein Alignment ncd and Klp59C

DIOPT Version :9

Sequence 1:NP_001287592.1 Gene:ncd / 43517 FlyBaseID:FBgn0002924 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_611759.1 Gene:Klp59C / 37671 FlyBaseID:FBgn0034824 Length:626 Species:Drosophila melanogaster


Alignment Length:620 Identity:147/620 - (23%)
Similarity:251/620 - (40%) Gaps:138/620 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 SKVSRLGGALTVSSQRLVRPAAPSSITATAVKRP--------PVTRPAPRAAGGAAA-------- 168
            :::.:|.|    ...:|:....|...|....:.|        |....:||.:||.||        
  Fly    22 AEIIKLEG----GDSKLITVEWPEGHTVRGKELPLELVVLMNPHIFDSPRCSGGNAASANQTASI 82

  Fly   169 -----KKPAGTGAAASSGAAAAAPKRIAPYDFKARFHDLLEKHKVLKTKYEKQTEDMGELESMPQ 228
                 |:...||:.:...|.|...::.||   ..|..:::.:.:.::.:.|::.|          
  Fly    83 SPRSMKQRIATGSLSPVLATAPPRQQTAP---PVREDEVVHQAERMRKERERRRE---------- 134

  Fly   229 QLEETQNKLIETESSLKNTQSDNECLQRQVKQHTAKIETITSTLGRTKEELSELQAIHEKVKTEH 293
              .:.:.:|...:...::..:.|..:.|.::....::|:.....|.|.|.::..|.         
  Fly   135 --AQARTRLDREQGKNEDPGNPNWEVARMIRLQREQMESQRVRSGTTNERINCHQI--------- 188

  Fly   294 AALSTEVVHLRQRTEELLRCNEQQAAELETCKEQLFQSNMERKELHNTVMDLRGNIRVFCRIRPP 358
                  :|.:|:|.                         :.||||.:...|:         :..|
  Fly   189 ------MVCVRKRP-------------------------LRRKELADREQDV---------VSIP 213

  Fly   359 LESEENRMCCTWTYHD-ESTVELQSIDAQAKSKMGQQIFSFDQVFHPLSSQSDIFEMVS-PLIQS 421
            .:.       |...|: ...|.|...       :....|.||.||....|.:.::|..: |||:.
  Fly   214 SKH-------TLVVHEPRKHVNLVKF-------LENHSFRFDYVFDEECSNATVYEFTARPLIKH 264

  Fly   422 ALDGYNICIFAYGQTGSGKTYTMDG------VPESVGVIPRTVDLLFDSIR--GYRNLGWEYEIK 478
            ..||.....||||||||||||||.|      .....|:.......:|.:::  .|..|  ..::.
  Fly   265 IFDGGMATCFAYGQTGSGKTYTMGGQFPGRHQSSMDGIYAMAAKDVFSTLKTVPYNKL--NLKVY 327

  Fly   479 ATFLEIYNEVLYDLLSNEQKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATAS 543
            .:|.|||...::|||...:.  ::|:.::....:.|..:|:..|.:...:..|:......|.:..
  Fly   328 CSFFEIYGTRVFDLLMPGKP--QLRVLEDRNQQVQVVGLTQNPVQNTAEVLDLLELGNSVRTSGH 390

  Fly   544 TAGNERSSRSHAVTKLELIGRHAEKQEISVGSINLVDLAGSE------SPKTSTRMTETKNINRS 602
            |:.|.:|||||||.::.|.....||..   |..:|:||||:|      |....||: |...||:|
  Fly   391 TSANSKSSRSHAVFQIVLRSAAGEKLH---GKFSLIDLAGNERGADNSSADRQTRL-EGSEINKS 451

  Fly   603 LSELTNVILALLQKQDHIPYRNSKLTHLLMPS-LGGNS-KTLMFINVSPFQDCFQESVKSLRFAA 665
            |..|...|.||.::..|:|:|.||||.:|..| :||.. ||.|...:||.....:.::.:||:|.
  Fly   452 LLVLKECIRALGRQSSHLPFRGSKLTQVLRDSFIGGKKVKTCMIAMISPCLHSVEHTLNTLRYAD 516

  Fly   666 SVN--SCKMTKAKR-------NRYLNNSVANSSTQ 691
            .|.  |.:...:||       :..:::.|..||||
  Fly   517 RVKELSVESIPSKRMPDANLGSTSMSDIVCQSSTQ 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ncdNP_001287592.1 KISc_C_terminal 346..672 CDD:276817 101/345 (29%)
KISc 348..678 CDD:214526 103/356 (29%)
Klp59CNP_611759.1 KISc_KIF2_like 187..519 CDD:276818 108/402 (27%)
Kinesin 193..520 CDD:278646 107/382 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437816
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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