Protein Alignment ncd and Kif3b

DIOPT Version :10

• Sequence 1: NP_476651.1
• Gene: ncd / 43517
• FlyBaseID: FBgn0002924
• Length: 700
• Species: Drosophila melanogaster
• Sequence 2: NP_001099999.1
• Gene: Kif3b / 296284
• RGDID: 1306815
• Length: 747
• Species: Rattus norvegicus
• Alignment Length: 348
• Identity: 137/348 - (39%)
• Similarity: 194/348 - (55%)
• Gaps: 32/348 - (9%)

  Fly   348 NIRVFCRIRPPLESEENRMCCTWTYHDESTVELQSIDAQAKSKMG-----QQIFSFDQVFHPLSS 407
            ::||..|.| |:..:|...    .|.....|:::......|:..|     .:.|:||.|:...:.
  Rat     9 SVRVVVRCR-PMNGKEKAA----AYDKVVDVDVKLGQVSVKNPKGTSHEMPKTFTFDAVYDWNAK 68

  Fly   408 QSDIF-EMVSPLIQSALDGYNICIFAYGQTGSGKTYTMDGV---PESVGVIPRTVDLLFDSIRGY 468
            |.::: |...||:.|.|.|:|..||||||||:||||||:||   ||..||||.:.|.:|..|.
  Rat    69 QFELYDETFRPLVDSVLQGFNGTIFAYGQTGTGKTYTMEGVRGDPEKRGVIPNSFDHIFTHIS-- 131

  Fly   469 RNLGWEYEIKATFLEIYNEVLYDLLSNEQ-KDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLM 532
            |:...:|.::|::||||.|.:.||||.:| |.:|::  :.....:||.:::.........:.|:|
  Rat   132 RSQNQQYLVRASYLEIYQEEIRDLLSKDQTKRLELK--ERPDTGVYVKDLSSFVTKSVKEIEHVM 194

  Fly   533 HTAKMNRATASTAGNERSSRSHAVTKLEL----IGRHAEKQEISVGSINLVDLAGSE-SPKTST- 591
            :....||:..:|..||.||||||:..:.:    :|...| ..|.||.:||||||||| ..||..
  Rat   195 NVGNQNRSVGATNMNEHSSRSHAIFVITVECSEVGLDGE-NHIRVGKLNLVDLAGSERQAKTGAQ 258

  Fly   592 --RMTETKNINRSLSELTNVILALLQ-KQDHIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDC 653
              |:.|...||.|||.|.|||.||:. |..|||||:||||.||..|||||:||:|..||.|....
  Rat   259 GERLKEATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRLLQDSLGGNAKTVMVANVGPASYN 323

  Fly   654 FQESVKSLRFAASVNSCKMTKAK 676
            .:|::.:||:|   |..|..|.|
  Rat   324 VEETLTTLRYA---NRAKNIKNK 343

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ncd	NP_476651.1	PRK03918	<204..350	CDD:235175	0/1 (0%)
		KISc_C_terminal	346..672	CDD:276817	134/342 (39%)
Kif3b	NP_001099999.1	KISc_KIF3	8..340	CDD:276822	135/343 (39%)
		Smc	<355..>581	CDD:440809