DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ncd and klp9

DIOPT Version :9

Sequence 1:NP_001287592.1 Gene:ncd / 43517 FlyBaseID:FBgn0002924 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001342762.1 Gene:klp9 / 2539778 PomBaseID:SPBC15D4.01c Length:633 Species:Schizosaccharomyces pombe


Alignment Length:438 Identity:119/438 - (27%)
Similarity:186/438 - (42%) Gaps:105/438 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   349 IRVFCRIR--PPLESEENRMCCTWTYHDESTVELQSIDAQA----KSKMGQQIFSFDQVFHPLSS 407
            |::|.|::  .|.....|:.......:|...:.....|:.|    |||..::. ||.:||.|..:
pombe     2 IQIFLRVKKAQPSSDASNKYGFLTVLNDYEILLESPEDSHAYRVSKSKTLEKA-SFTKVFPPSCT 65

  Fly   408 QSDIFEMV-SPLIQSALDGYN-ICIFAYGQTGSGKTYTMDGVPESVGVIPRTVDLLFDSIRG--- 467
            |.|:|..: :|||..:|...| ..:|..|.:|:|||||:.|..:..||....:|.||.:|:|   
pombe    66 QLDVFSTICAPLIADSLVNMNDTLLFTLGVSGAGKTYTLFGPSDRPGVAFLALDALFYAIKGREA 130

  Fly   468 ----------------------------------------------YRNLGWEYEIKATFLEIYN 486
                                                          .....::|.|..:|.||||
pombe   131 SPQTVEFLRSQLEKCKIVEASKFLRGEAPLDIKVPNTEYYASHFPKIEEKNYQYAIYLSFAEIYN 195

  Fly   487 EVLYDLLSNEQ---KDMEIRMAKNNKND---------IYVSNITEETVLDPNHLRHLMHTAKMNR 539
            :.::|||....   ....:.:.|::.:|         ::|||.||...|       :....::.:
pombe   196 DRIFDLLEKASFFGHRHALSLKKSSTSDKKSIAGIQKVFVSNTTEAYKL-------IQKVLQLRK 253

  Fly   540 ATASTAGNERSSRSHAVTKLELIGRHAEKQEISVGSINLVDLAGSESPKTSTRMTETK------- 597
            :| ||..|..|||||.:..:||.....:..:.....|:||||||||    .||..||.       
pombe   254 ST-STKSNSVSSRSHLIMSIELFKVCTKSNKFESCQIDLVDLAGSE----RTRSAETSGLLLREG 313

  Fly   598 -NINRSLSELTNVILALLQ----KQDHIPYRNSKLTHLLMPS--LGGNSKTLMFINVSPFQDCFQ 655
             :|||||..|...:.||.:    ||..||:|.||||.||..|  |.|.:...|.:|:.|| ..|.
pombe   314 ASINRSLLTLGQCLEALRRKHEGKQHIIPFRQSKLTELLFHSGHLSGLAGINMLVNIDPF-GSFD 377

  Fly   656 ESVKSLRFAAS--------VNSCKMTKAKRNRYLNNSVANSSTQSNNS 695
            |:.:.:|::|:        :|....:::..:..|..|...|||::..|
pombe   378 ENAQVMRYSANAREILPPPLNENSGSQSPSHSLLQKSKNTSSTKALTS 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ncdNP_001287592.1 KISc_C_terminal 346..672 CDD:276817 113/413 (27%)
KISc 348..678 CDD:214526 113/419 (27%)
klp9NP_001342762.1 KIP1 40..633 CDD:227392 112/400 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.