DRSC/TRiP Functional Genomics Resources

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Protein Alignment ncd and klp6

DIOPT Version :9

Sequence 1:NP_001287592.1 Gene:ncd / 43517 FlyBaseID:FBgn0002924 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001342739.1 Gene:klp6 / 2539700 PomBaseID:SPBC1685.15c Length:784 Species:Schizosaccharomyces pombe


Alignment Length:425 Identity:136/425 - (32%)
Similarity:207/425 - (48%) Gaps:69/425 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   292 EHAALSTEVVHLRQRTEELLRCNEQQAAELETCKEQL--------------FQSNMERKELHNTV 342
            |.:::|. .|.:|..||.    .:...||....||.|              |.:|..||    .|
pombe     3 EGSSISV-AVRVRPFTER----EKGLLAETPKSKEFLGDGSLAVSNTSSNTFCTNGIRK----IV 58

  Fly   343 MDLRGNIRVFCRIRPPLESEENRMCCTWTYHDESTVELQSIDAQAKSKMGQQIFSFDQVFHPLSS 407
            ..|..|:.:|   .||   |||.:           .::|.....|..:.....::||::|...:|
pombe    59 RVLDDNVLIF---DPP---EENPL-----------AKVQKSLLPAGKRFRDVRYAFDRLFGEEAS 106

  Fly   408 QSDIFE-MVSPLIQSALDGYNICIFAYGQTGSGKTYTMDGVPESVGVIPRTVDLLFDSIRGYRNL 471
            |.|::: ...||:.|.|.|||..:||||.||.|||:|:.|.|:..|:|..|:..|.|.:.|.:..
pombe   107 QEDVYKGTTEPLLDSVLQGYNATVFAYGATGCGKTHTISGRPDDPGIIFLTMRALLDRVEGLKRT 171

  Fly   472 GWEYEIKATFLEIYNEVLYDLLSNEQKDME----IRMAKNNKNDIYVSNITEETVLDPNHLRHLM 532
             ...:|..::||||||.:.|||..:...||    :.:.::.:.::.|..::..|   |.:|..:|
pombe   172 -MNVDISVSYLEIYNEKIRDLLVQDPLSMEKPKSLNICEDAEQNVSVPGLSYFT---PTNLEEVM 232

  Fly   533 H---TAKMNRATASTAGNERSSRSHAVTKLEL--IGRHAEKQEIS-------VGSI-NLVDLAGS 584
            .   ....||..:.|..|..|||||||.::.:  ..:..||||.|       |.|: :.:|||||
pombe   233 EIIIRGNSNRTMSPTEANAVSSRSHAVLQIYITQTPKSGEKQEESESQNSHKVRSVFSFIDLAGS 297

  Fly   585 E----SPKTSTRMTETKNINRSLSELTNVILALLQ--KQDHIPYRNSKLTHLLMPSLGGNSKTLM 643
            |    :.....|:.|..||||||..|.|.|.:|.:  ::.|:|||:||||.||..|||||.:|.|
pombe   298 ERASATKNRGKRLVEGANINRSLLALGNCINSLCEPRRRQHVPYRDSKLTRLLKFSLGGNCRTCM 362

  Fly   644 FINVSPFQDCFQESVKSLRFAASVNSCKMTKAKRN 678
            .:.:||..:.:.|:..:|::.....:.| ||..||
pombe   363 IVCISPSSEHYDETHNTLKYGNRAKNIK-TKVSRN 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ncdNP_001287592.1 KISc_C_terminal 346..672 CDD:276817 114/349 (33%)
KISc 348..678 CDD:214526 117/353 (33%)
klp6NP_001342739.1 KISc_KIP3_like 6..389 CDD:276821 130/412 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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