DRSC/TRiP Functional Genomics Resources

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Protein Alignment ncd and klp-3

DIOPT Version :9

Sequence 1:NP_001287592.1 Gene:ncd / 43517 FlyBaseID:FBgn0002924 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_001022332.1 Gene:klp-3 / 191697 WormBaseID:WBGene00002216 Length:598 Species:Caenorhabditis elegans


Alignment Length:538 Identity:173/538 - (32%)
Similarity:269/538 - (50%) Gaps:72/538 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 DLLEKHKVLKTKYEKQTEDMGELESMPQQLEETQ--NKLIETESSLKNTQSDNE---CLQRQ--- 257
            ::|:...||...:...:|:...|::...|:::..  |:|:||:...::..:.||   .|.|.   
 Worm    76 NMLKGISVLSLDFGNLSEENLRLKNALSQMQKVARVNELLETDEDYESDMTSNEDRFALSRDSSC 140

  Fly   258 --------------VKQHTAKIETITSTLGRTKEELSELQAIHEKVKTE-----HAALSTE---- 299
                          :|.:...::::     |.:....:||...|::|||     ..||.|:    
 Worm   141 SVPRSVSPQPTGDVIKPYPQMVQSM-----REEGHWKKLQRCAEELKTEKDELKRLALDTKDAFN 200

  Fly   300 ------VVHLRQRTEELLR-CNEQQAAELETCKEQLFQSNMERKELHNTVMDLRGNIRVFCRIRP 357
                  .:.|..:|.:..| ..|:..||:|           :||:|||.:::|.||||||.||||
 Worm   201 VCMAEMRMMLTSKTTDFFRVLIERYKAEME-----------KRKQLHNQLVELNGNIRVFYRIRP 254

  Fly   358 PL--ESEENRMCCTWTYHDESTVELQSIDAQAKSKMGQQIFSFDQVFHPLSSQSDIFEMVSPLIQ 420
            .|  |::..:........|...|.:.:.....|:..|.     |:|.....||..||..|||:|.
 Worm   255 QLASETDNQKPVVVIDEMDNGVVHVSNTTGTRKTSAGA-----DKVIPTDFSQDQIFNEVSPIIT 314

  Fly   421 SALDGYNICIFAYGQTGSGKTYTMDGVPESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIY 485
            |.:||||:||||||.|||||||||||.....|:..|.:..||::.: .|....:|:||...:|||
 Worm   315 SCIDGYNVCIFAYGHTGSGKTYTMDGPVTMPGINQRAIMQLFETAK-ERTGDIKYDIKVAMMEIY 378

  Fly   486 NEVLYDLLSNEQKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNERS 550
            ||.:.|||:....::.||..:..::.|  ..:.|.:|.....:...:...:.|:|.|:|..|..|
 Worm   379 NEKIRDLLNTSNTNLAIRQTEEGRSSI--PGLEEVSVNSAEEVTETLARGRKNKAVAATEANIES 441

  Fly   551 SRSHAVTKLELIGRHAEKQEISVGSINLVDLAGSE----SPKTSTRMTETKNINRSLSELTNVIL 611
            ||||.:.::.:...:...:..:||.:|||||||||    :..|...:.|.:.||:|||||.||:|
 Worm   442 SRSHVIVRVLVSATNLITKATTVGRLNLVDLAGSERVSQTNATGQLLKEAQAINKSLSELGNVVL 506

  Fly   612 ALLQKQDHIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASVNSCKMTKA- 675
            ||.|.|.|||:||.:||.:|..||.|:||||:.:::||......||:.|:.||..:... .||: 
 Worm   507 ALRQNQKHIPFRNCQLTRILEDSLNGDSKTLVIVHLSPDAKSLNESISSVNFAEKIGQV-FTKSG 570

  Fly   676 --KRNRYLNNSVANSSTQ 691
              ||.....:....||.|
 Worm   571 TMKREPTRRSMTGISSGQ 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ncdNP_001287592.1 KISc_C_terminal 346..672 CDD:276817 128/331 (39%)
KISc 348..678 CDD:214526 130/338 (38%)
klp-3NP_001022332.1 KISc_C_terminal 243..566 CDD:276817 128/331 (39%)
KISc 245..569 CDD:214526 128/332 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D181609at33208
OrthoFinder 1 1.000 - - FOG0000325
OrthoInspector 1 1.000 - - oto17843
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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