Protein Alignment ncd and psf-1

DIOPT Version :9

• Sequence 1: NP_001287592.1
• Gene: ncd / 43517
• FlyBaseID: FBgn0002924
• Length: 700
• Species: Drosophila melanogaster
• Sequence 2: NP_496153.2
• Gene: psf-1 / 187885
• WormBaseID: WBGene00011275
• Length: 201
• Species: Caenorhabditis elegans
• Alignment Length: 216
• Identity: 43/216 - (19%)
• Similarity: 74/216 - (34%)
• Gaps: 66/216 - (30%)

  Fly   300 VVHLRQRTEELLRCNEQQAAELETCKEQLFQSNMERKEL------HNTVMDLRGNIRVFCRIRPP 358
            |:.:::..:.|...|.:...:.....::|||.|....|.      |::.: |:..:...|.||.
 Worm    19 VLEMKRNPDVLPPYNTELVRQCYQKIDELFQKNAAVVEKIRAGLPHDSTL-LQPRLAAMCHIRR- 81

  Fly   359 LESEENRMCCTWTYHDESTVELQS--------IDAQAKSKMGQQIFSFDQVFHPLSS-----QSD 410
                     |...|.:|....::|        :.|..::.:......|   |:..||     ||:
 Worm    82 ---------CMMAYVNERKNRIRSFRWKYGGALPASVRNALCDAEIQF---FNEYSSTLARFQSN 134

  Fly   411 IFE-MVSPLIQS-----------ALDGYNICIFAYGQTGSGKTYTMDGVPESVGVIPRTVDLLFD 463
            :.| .|:.|:.|           ||:.|            |:..|.||.         .|.|..|
 Worm   135 LGEGGVNLLLHSAPPKSLFVQVRALEDY------------GEFETSDGT---------QVQLSKD 178

  Fly   464 SIRGYRNLGWEYEIKATFLEI 484
            |:........|..|:...||:
 Worm   179 SLHSLPRQDCEMLIRQGVLEL 199

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ncd	NP_001287592.1	KISc_C_terminal	346..672	CDD:276817	33/164 (20%)
		KISc	348..678	CDD:214526	33/162 (20%)
psf-1	NP_496153.2	GINS_A_psf1	12..137	CDD:212548	24/131 (18%)
		COG5230	18..200	CDD:227555	43/216 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910