DRSC/TRiP Functional Genomics Resources

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Protein Alignment ncd and klp-15

DIOPT Version :9

Sequence 1:NP_001287592.1 Gene:ncd / 43517 FlyBaseID:FBgn0002924 Length:700 Species:Drosophila melanogaster
Sequence 2:NP_491633.1 Gene:klp-15 / 172213 WormBaseID:WBGene00002225 Length:587 Species:Caenorhabditis elegans


Alignment Length:691 Identity:205/691 - (29%)
Similarity:311/691 - (45%) Gaps:137/691 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 RIRAGLGGGAAGAGAFNVNANQTYCGNLLPPLSRDLNN--LPQVLERRGGGARAASPEPMKLGHR 88
            |.|:||.....||      ..:...|....|.:::.|:  :|          |.::|..:.:|..
 Worm     5 RRRSGLFRSTIGA------TPKITRGRAAAPSTKEANSTTIP----------RQSAPGGITIGAA 53

  Fly    89 AKLRRSRSACDINELRGN----KRTAAA---------PSLPSIPSKVSRLGGALTVSSQRLVRPA 140
            |:...||.........|.    :|:|.|         |::.|..|::|.|..|.|....|..||.
 Worm    54 ARRPPSRLPTPTTPATGRASLPERSAMAKPASCSRPIPTMQSTASRISTLTAASTFRQLRTGRPP 118

  Fly   141 APSS--ITATAVKRPPVTRPAPRAAGGAAAKKPAGTGAAASSGAAAAAPKRIAPYDFKARFHDLL 203
            .||:  .|||:..:|.|||..|      .|:||.                               
 Worm   119 PPSTQRSTATSSLKPSVTRARP------VAQKPI------------------------------- 146

  Fly   204 EKHKVLKTKYEKQTEDMGELESMPQQLEETQNKLIETESSLKNTQSDNECLQRQVKQHTAKIETI 268
                                  :|.::...:.|:.:.||::.......|..:.:::....|:|..
 Worm   147 ----------------------LPSKMALLEEKIAQLESAMAEATDFAEHQKSKIQILDGKLEGA 189

  Fly   269 TSTLGRTKEELSELQAIHEKVKTEHAALSTEVVHLRQRTEELLRCNEQQAAELETCKEQLFQSNM 333
            ...|...:::||.|:.:: |.|.|      |....|....:|              ::.|.:...
 Worm   190 DRKLISLQDQLSTLKEVN-KAKVE------ECEDYRVHNNDL--------------RDLLNEKEA 233

  Fly   334 ERKELHNTVMDLRGNIRVFCRIRPPLESEENRMCCTWTYHDESTVELQSIDA---QAKSKMGQQI 395
            |.::|||.|:||||.|||..|:||.::||.:.        ..|.:|..:||.   ...||.| .:
 Worm   234 ELRKLHNDVVDLRGQIRVAVRVRPLIKSEADA--------SSSAIEYPAIDTIRINEGSKPG-IV 289

  Fly   396 FSFDQVFHPLSSQSDIFEMVSPLIQSALDGYNICIFAYGQTGSGKTYTM-DGVPESVGVIPRTVD 459
            ..|::||.|:.||.::|..|...|:|:|.|||:.:.||||||||||:|| .|..|..|:|||...
 Worm   290 VKFEKVFTPVFSQKEVFANVEEFIRSSLHGYNVGLIAYGQTGSGKTHTMRGGNGEEEGIIPRAAA 354

  Fly   460 LLFDSIRGYRNLGWEYEIKATFLEIYNEVLYDLLSNEQKDMEIRMAKNNKNDIYVSNITEETVLD 524
            .||...|...:|||:::...:|||:||.|.|||||    |..:...:.|...:.:..::|.|:.:
 Worm   355 FLFAESRKLESLGWKFDFSLSFLEVYNNVAYDLLS----DRAVVQLRLNDQTVSMIGLSEHTISN 415

  Fly   525 PNHLRHLMHTAKMNRATASTAGNERSSRSHAVTKLELIGRHAEKQEISVG-SINLVDLAGSESPK 588
            .:.:..|:..|...|.||:|..||.|||||||...: |..|.....||.. .:.||||||||..|
 Worm   416 VSDVARLLRVADGGRKTAATKCNESSSRSHAVYMWK-ITAHQPSTGISTSCQLKLVDLAGSERAK 479

  Fly   589 TS----TRMTETKNINRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLG-GNSKTLMFINVS 648
            .|    .:..|..|||:|||.|...|.....::.|:.||:||||.:||..|| |||||::.:|::
 Worm   480 ESGVSGDQFKEMTNINQSLSILQMCISQQRSQKGHVSYRDSKLTQVLMDCLGRGNSKTMVVVNLN 544

  Fly   649 PFQDCFQESVKSLRFAASVNSCKMTKAKRNRYLNNSVANSS 689
            |..:...||.:|:.||:.:.|..:..|.:.|.|...|:..|
 Worm   545 PCNEQATESKRSIEFASKMRSTNIGSAVQQRTLLGDVSQMS 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ncdNP_001287592.1 KISc_C_terminal 346..672 CDD:276817 132/335 (39%)
KISc 348..678 CDD:214526 131/339 (39%)
klp-15NP_491633.1 PHA03378 <27..153 CDD:223065 37/194 (19%)
Tropomyosin_1 <147..242 CDD:372267 22/115 (19%)
ABC_tran_CTD 147..193 CDD:379824 7/45 (16%)
KISc 248..564 CDD:276812 129/329 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0239
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 236 1.000 Inparanoid score I2140
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D181609at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101893
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1242
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.770

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